AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla9g03252 ATGGGTGCATCTGAGTCTATGGAAGCAATAGAAGACGAGGAACACGACGGGTATAAGGAAGATATAGATGATCAAGGTGATTACGAAACAATAAAGTTATTGAGAAAAGATATGACAAATATTCTTGAACATGACCTTGAAATGACACCTTCTATATCGTCTTTGTCACCTCAATTATCATCTTTCGACACCCCACACATTGATCAAATCCAAACATGTCTTTACTTGTTACGCAAGTCTTGCTGTCCATGTACCATCTATGAATATTTGGAGATGAGTTTTCCAGAGCACATGATACAAACCTCGGATGCACTACAAGATATGAGTCAAGGAACTTGGGAGGGTTGCCATCACTCGGATGTATATAGCCCTTCAGTTGTAAGCATAATGGAGAGACTACAACCTGATTTTTGTGCACCCTCTGGAGAAACTCTAAGACAGGTGGAATTTCGAATGATGGAGTTTCTAAATGCAACAGTAACATATTCTGTTCCTCCACTACCCAAATTGGATTTATCAACAAGGCCTAGACTAGGAGCCCCCAAGAAAAAGTCAAGCAAGAGCCGACTACAAATGGTGCACACAAGTGCAGATCATGAGGCTGATGACGAGATGACCCCTCGAGCGCCTAGCAAGCATCGTGAACCTAAAGTGTTTCCTGAACCAATCATGGAAAAAATTAGCAACAACAATAATAATCATGCCAACAATAACAACTCCCATCTTTCAACTGATTTGTCATGTTGTATAGGCATGTTTAGTCATTCGATACCTATCAAATGTCTAGTGACGGGTATCCTTGGTTGTAGTCCGACTATGACCAACAAGATATGCATAGAAGATTCGTCGATAACAGTATTGCAATATTCCCAGAAAATGGGTTGGCAAATCAAAAGAGTGAACGATACTTGTCATCTGAGGCTTATGTAG 930 40.43 MGASESMEAIEDEEHDGYKEDIDDQGDYETIKLLRKDMTNILEHDLEMTPSISSLSPQLSSFDTPHIDQIQTCLYLLRKSCCPCTIYEYLEMSFPEHMIQTSDALQDMSQGTWEGCHHSDVYSPSVVSIMERLQPDFCAPSGETLRQVEFRMMEFLNATVTYSVPPLPKLDLSTRPRLGAPKKKSSKSRLQMVHTSADHEADDEMTPRAPSKHREPKVFPEPIMEKISNNNNNHANNNNSHLSTDLSCCIGMFSHSIPIKCLVTGILGCSPTMTNKICIEDSSITVLQYSQKMGWQIKRVNDTCHLRLM 309
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla9g03252 309 MobiDBLite consensus disorder prediction 193 216 - -
Chla9g03252 309 Gene3D - 68 308 IPR029033 -
Chla9g03252 309 MobiDBLite consensus disorder prediction 171 216 - -
Chla9g03252 309 MobiDBLite consensus disorder prediction 1 22 - -
Chla9g03252 309 SUPERFAMILY Phosphoglycerate mutase-like 95 307 IPR029033 -
Chla9g03252 309 PANTHER PUTATIVE-RELATED 166 309 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla9g03252 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
43163 Chla8g03151 Chla9g03252
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr8:92434229 Chla9g03252 Chla-Chr9:111691410 dispersed
Chla Chla-Chr9:111691410 Chla8g02994 Chla-Chr8:87984953 transposed