Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla9g03711 | ATGCCATCATTAATCCTAGAAGAACCACTTTTAACGCCAACCCAAGACAGATTCTGCATGTTCCCAATTCACTACCCTCAAATATGGGAAATGTACAAAAAAGCCCAAGCTTCATTCTGGACAGCAGAAGAAGTGGACTTATCAGCAGATATCCGTCACTGGGAGTCGTTAACTAACGGAGAACGTCATTTCATTACACACGTTCTCGCGTTTTTCGCGTCTTCTGATGGCATTGTGTTGGAGAATTTGGCTAGTAGGTTTATGAATGATGTCCAAGTAGCCGAAGCGAGGGCTTTTTACGGGTTTCAAATTGCGATAGAGAATATACATTCAGAGATGTATAGTTTGCTTTTGGAAACGTATGTTAAGGATGGGAAGGAGAAAGATAGGTTGTTTCGGGCAGTTGAGACAATTCCGTGTGTTGAGAAAAAGGCGAAGTGGGCGATGAAGTGGATTGATGGCTCGGAGTCGTTTGCTGAAAGGATTATTGCGTTTGCGTGTGTTGAAGGTATATTCTTTTCAGGAAGCTTTTGCGCGATATTTTGGTTAAAAAAGCGTGGCTTAATGCCAGGACTAACCTTCTCAAACGAGTTAATCTCACGAGACGAAGGCCTCCACTGCGATTTCGCATGCCTGCTCTACACTTTGCTAAACAACAAACTAACCGAAGAACGCGTAAAGTCCATAGTATCTGACGCAGTTGATATCGAACGTGAATTTGTATGTGACGCATTACCATGTGCACTAGTTGGCATGAATGGTGAACTCATGAGTACATATATCGAGTTTGTGGCTGATAGGTTGTTGGTGTCCTTAGGATTTAGCAAAATGTACAATGTTTCGAACCCGTTTGATTGGATGGAATTGATTTCGTTACAAGGGAAGACGAATTTTTTCGAGAAGCGAGTAGGGGAGTATCAAAAGGCTTCGATTATGTCGAATTTGAATGCAAATGGTGGTGATCAACATGTGTTCAAGATGGATGAAGATTTTTAA | 996 | 41.87 | MPSLILEEPLLTPTQDRFCMFPIHYPQIWEMYKKAQASFWTAEEVDLSADIRHWESLTNGERHFITHVLAFFASSDGIVLENLASRFMNDVQVAEARAFYGFQIAIENIHSEMYSLLLETYVKDGKEKDRLFRAVETIPCVEKKAKWAMKWIDGSESFAERIIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLTEERVKSIVSDAVDIEREFVCDALPCALVGMNGELMSTYIEFVADRLLVSLGFSKMYNVSNPFDWMELISLQGKTNFFEKRVGEYQKASIMSNLNANGGDQHVFKMDEDF | 331 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla9g03711 | 331 | PIRSF | NrdB | 7 | 317 | IPR000358 | GO:0009263(InterPro) | |
| Chla9g03711 | 331 | CDD | RNRR2 | 18 | 292 | IPR033909 | GO:0009263(InterPro) | |
| Chla9g03711 | 331 | PANTHER | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN | 8 | 331 | IPR000358 | GO:0009263(InterPro) | |
| Chla9g03711 | 331 | Pfam | Ribonucleotide reductase, small chain | 17 | 283 | IPR000358 | GO:0009263(InterPro) | |
| Chla9g03711 | 331 | SUPERFAMILY | Ferritin-like | 5 | 308 | IPR009078 | - | |
| Chla9g03711 | 331 | Gene3D | Ribonucleotide Reductase, subunit A | 3 | 308 | IPR012348 | GO:0016491(InterPro) | |
| Chla9g03711 | 331 | ProSitePatterns | Ribonucleotide reductase small subunit signature. | 106 | 122 | IPR030475 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla9g03711 | K10808 | ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] | ||||
| Chla9g03711 | K00526 | ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 43155 | Chla8g03096 | Chla9g03711 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr9:132943439 | Chla7g06560 | Chla-Chr7:279763459 | dispersed | |
| Chla | Chla-Chr1:39226333 | Chla9g03711 | Chla-Chr9:132943439 | transposed | |
| Chla | Chla-Chr1:163393603 | Chla9g03711 | Chla-Chr9:132943439 | transposed | |
| Chla | Chla-Chr8:90878733 | Chla9g03711 | Chla-Chr9:132943439 | wgd |