Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla9g03728 | ATGGTACTAGGATTGAAGACGAGAAACAGGAACAGCCCGTACGTCCATCTTGATTACGTTATCAATCTAGTAGAGATTAAGCCGTGGCCTCCATCACAGTCGCTAAGATCAGTTCGGTCTGCATTGATTCAATGGGAGCATGGTGACAAGTTTTCAGGGTCTACTAAAGCAGTTGCGCCTTCAAATGCTTTTGGTTTGGGTGTAGGTGATGGTAAAATCGAGTTTAATGAGTCTTTCAAACTTCCTGTGACATTATCACGGGATATGTCAGTTAAGACTAGCAATAACGAATCTTTCTTAAGGAATTGTGTAGAGTTTAATATGTACGAACCACGTAGGGACAAAACGGTAAAAGGGCAGTTGTTGGCTACTGCAGTTATAGATTTTGCGGAGTATGGTATTTTTGACGATAGTTTGGTTATTTGTGTGCCTATGAATTGCAAGAGGATGTTTGGTAATACGGCTCAGCCTATGCTTTTTGTTGAAATCCAAATGGTTGAGAAGAATAACCGCATGAGGTGTTCATTTGGGGAGAGATTGATAAGGGAAGGATCGCTGGATAGGAATGTTTGTGCGTTGATGAATGCAGAGTATGCTGAGGAAGCTGACACTGCCTCCGTTACAGATAATAATGAGGATGATGATGTTTCCTCCCAGTCTTCCATGGATACTGGTTCTTCAGCGTCTGGTTCAAATGGGAATGTAACTCCTCAAAGTGAGAACGGGTCTGAAGCCATTTGTGGAAGCTCAGAAAAGGTCAATAGTCAAGAAGTCTCGGTTCAAAGTAAAAGGGCCATATTTGAAGAACGTATTTCATCATCAAAAGACTTATATTCTGAACTAGAAAATGCTCGTACCACTTTATCAAATATCCGTAACTCAAGATTCACAATGCTCCCACAAAAGACTGAATCATGTAGTAGCGTGAAACTATCAAAGCCGATTGGTAAGAATGACACTAGAAAAGTGATGGTCTATGAAGCGAACAATGGAAGTCAAATCATTGGAGATATTGGAACTGATGGTGATAGTAAAAGGAATGCGAAGCGACTTGATTCTTCAATGGATTCAGGAATAAGCATCGGGTCAGTTAGAACTAGCAAAGTATTAGAGAAATTTAAAAACGTCGGTATTTGTGACAAGAATTATGAGAAGAACTTAACAGTTAATGAGATAAGTGATGCAAGCAAAGTACAACACTTGGAACAAAGAATGAAACTTCTTGAAGGCGAACTACGAGAATCTGCAGCTATTGAGATTAGTCTTTACTCAGTAGTTGCAGAGCACGGAAGATCCACTAATAAAGTTCATGCCCCTGCTCGACGTCTTTCTAGGTTGTACCTTCATGCATGCAAAGATAATTCTTTCAGGAGAGCAAGTTCAGCAAAAAGTATTGTGTCAGGACTGATTTTAGTCGCAAAAGCTTGTGGAAATGATGTCCCAAGGTTGACTTTCTGGTTGTCAAATTCTGTTGTACTAAGAGCCATAATACATAAAAAATTTGACAAGGAGAAGGTATCTGGGATAGTTGAGAAAGGAAGTACCGAGAATTCTAATGAACGGGAGGACCCTTGTATGGTTATATCTTTGTTGGAAAAAGTAGAATCTTGGATCTTCATGCGCATTATTGAGTCCATCTGGTGGCAGACTCTTGCTCCTTATATGCAATCCACTGCTGCAAAGGGAATCCCTAGAGTTGTAGATTCAGGCTATAATAAAACCTGTCAAACAACATCTGGTTCACTTGAGCATGAGCGAGTCCACACCTCCTTGAAACTTTGGAAAACCGCTTTCATGGATGCTTGTGAAAGAATTTGTCCTGTTCGAGCTGCAGGACATGATTGCGGTTGCTTGAGTATCCTTTCTATGTTGATAATGGAGCAATGCATGGCTAGATTAGATGTAGCTATGTTCAATGCCATTCTTCGTCAGTCGGAAGATGAAGGTCCAACGGACCCTGTATCAGACCCCATCAGTGATGCTGGGGTTCTTCCTATTCCATCAGGGAAAGCAAGCTTTGGAGCCGGTGCACAACTGAAAACGACAATAGGAAACTGGTCCAGTTGGCTCACAGATCTATTTGGCTCACCTATCTCTTTTCATCTCCTTACTGCTCTGAGTGAGCTCATGATGCTTCCTAAGGATATGCTCTTAAGTAACACAGTCCGAAAAGAGGTGTGCCCTAATATTGGTGTAGCATTAATAAAGAGGATACTTGATAGATTCGTTCCGGATGAATTTTGCCCAGATGTGATTCCCGAGGTGGTTCTTGAATCACTAAACTCAAAGGATTTAATGGAGAGTGGCGAAGATTGTATTACAAGTCTCCCCTGTCGAGCAGCTCCTATTGTATATCAACCTCCTTCTGCATCTCTAATAGGATGCATCTTAGGAAATGATGGAAGCCGAGCTCATTTGTCACGCAGTGGATCATCAATCCTAAAAAAGTCAAATACAAGCGATGATGAACTCGATGAATTGGATTCACCTTTGACTTTAATAATTGACTCCTGTCAGCCTGTAGCTGCATCAACAAAACCTGTATGGGCATTGAAAGATGTCGGAAATGGCAATACTAGTATTAGGTATCAACTCCTTAGAGAGGTATGGATGAGTAGCGATTAG | 2625 | 41.14 | MVLGLKTRNRNSPYVHLDYVINLVEIKPWPPSQSLRSVRSALIQWEHGDKFSGSTKAVAPSNAFGLGVGDGKIEFNESFKLPVTLSRDMSVKTSNNESFLRNCVEFNMYEPRRDKTVKGQLLATAVIDFAEYGIFDDSLVICVPMNCKRMFGNTAQPMLFVEIQMVEKNNRMRCSFGERLIREGSLDRNVCALMNAEYAEEADTASVTDNNEDDDVSSQSSMDTGSSASGSNGNVTPQSENGSEAICGSSEKVNSQEVSVQSKRAIFEERISSSKDLYSELENARTTLSNIRNSRFTMLPQKTESCSSVKLSKPIGKNDTRKVMVYEANNGSQIIGDIGTDGDSKRNAKRLDSSMDSGISIGSVRTSKVLEKFKNVGICDKNYEKNLTVNEISDASKVQHLEQRMKLLEGELRESAAIEISLYSVVAEHGRSTNKVHAPARRLSRLYLHACKDNSFRRASSAKSIVSGLILVAKACGNDVPRLTFWLSNSVVLRAIIHKKFDKEKVSGIVEKGSTENSNEREDPCMVISLLEKVESWIFMRIIESIWWQTLAPYMQSTAAKGIPRVVDSGYNKTCQTTSGSLEHERVHTSLKLWKTAFMDACERICPVRAAGHDCGCLSILSMLIMEQCMARLDVAMFNAILRQSEDEGPTDPVSDPISDAGVLPIPSGKASFGAGAQLKTTIGNWSSWLTDLFGSPISFHLLTALSELMMLPKDMLLSNTVRKEVCPNIGVALIKRILDRFVPDEFCPDVIPEVVLESLNSKDLMESGEDCITSLPCRAAPIVYQPPSASLIGCILGNDGSRAHLSRSGSSILKKSNTSDDELDELDSPLTLIIDSCQPVAASTKPVWALKDVGNGNTSIRYQLLREVWMSSD | 874 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla9g03728 | 874 | ProSiteProfiles | C2 NT-type domain profile. | 7 | 167 | IPR019448 | - | |
| Chla9g03728 | 874 | MobiDBLite | consensus disorder prediction | 202 | 260 | - | - | |
| Chla9g03728 | 874 | Coils | Coil | 398 | 418 | - | - | |
| Chla9g03728 | 874 | PANTHER | NUCLEAR PORE COMPLEX PROTEIN NUP205 | 12 | 872 | IPR021827 | GO:0005643(InterPro) | |
| Chla9g03728 | 874 | Pfam | N-terminal C2 in EEIG1 and EHBP1 proteins | 18 | 167 | IPR019448 | - | |
| Chla9g03728 | 874 | MobiDBLite | consensus disorder prediction | 211 | 260 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla9g03728 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 42988 | Chla7g03001 | Chla9g03728 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr7:131729449 | Chla9g03728 | Chla-Chr9:133946596 | dispersed | |
| Chla | Chla-Chr9:48375883 | Chla9g03728 | Chla-Chr9:133946596 | dispersed | |
| Chla | Chla-Chr9:48496405 | Chla9g03728 | Chla-Chr9:133946596 | dispersed |