Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chma3g03606 | ATGGAAAACGACTTCGATCGACTTCTCTTCTTCGAACACGCTCGCCGTACTGCCGAACTCACTTACACCAAAAACCCACTCGATACCGAGAATTTAACTAGATGGGCAGGCGCGTTGCTCGAATTATCCACTTTTCAATCTGTTCAGGATTCTAAACTTATGATCAAAGCTGCGATATCGAAATTGGATGAAGCGTTAAAGATTGATCCGAGGAAACATGATACGTTGTGGTGTATGGGAAATGCCCAAACTTCTTATGCTTTTTTGACTCGTGAGGAGGACGAAGCTAAGGGTTATTTTGATTCGGCGTATGTTTACTTTCAGCAGGCTGTTGAAGAGGATCCGGGGAACACGCTTTACCGCAAGTCATTGGAAGTGGCTGTAAAGGCTCCTGAATTACATGCTGAGCTCCATAAACAGGGATCTATTCAACAAGCTATGGGACCAGTGGCAGGAGGTGGTCCTTCCACCTCTTCTAGTATCAAGGGTCCGAAGACACAAAAAAACAGCGATCTGACATATGATATACTTGGGTGGGCTATTCTTGCTGTTACTATTGTGGCATGGGTTGGATTCGCCAAAGCAAATGTACCTCCACCACCTTCTCGATAA | 612 | 45.1 | MENDFDRLLFFEHARRTAELTYTKNPLDTENLTRWAGALLELSTFQSVQDSKLMIKAAISKLDEALKIDPRKHDTLWCMGNAQTSYAFLTREEDEAKGYFDSAYVYFQQAVEEDPGNTLYRKSLEVAVKAPELHAELHKQGSIQQAMGPVAGGGPSTSSSIKGPKTQKNSDLTYDILGWAILAVTIVAWVGFAKANVPPPPSR | 203 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chma3g03606 | 203 | MobiDBLite | consensus disorder prediction | 145 | 167 | - | - | |
| Chma3g03606 | 203 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED | 2 | 202 | IPR010547 | GO:0005742(InterPro)|GO:0045040(InterPro) | |
| Chma3g03606 | 203 | MobiDBLite | consensus disorder prediction | 151 | 167 | - | - | |
| Chma3g03606 | 203 | SUPERFAMILY | TPR-like | 11 | 126 | IPR011990 | GO:0005515(InterPro) | |
| Chma3g03606 | 203 | Gene3D | Tetratricopeptide repeat domain | 1 | 147 | IPR011990 | GO:0005515(InterPro) | |
| Chma3g03606 | 203 | Pfam | Plant specific mitochondrial import receptor subunit TOM20 | 5 | 194 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chma3g03606 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chma | Chma-Chr3:149559754 | Chma9g01208 | Chma-Chr9:24498584 | dispersed | |
| Chma | Chma-Chr1:99283536 | Chma3g03606 | Chma-Chr3:149559754 | transposed | |
| Chma | Chma-Chr2:160578858 | Chma3g03606 | Chma-Chr3:149559754 | transposed | |
| Chma | Chma-Chr3:210488989 | Chma3g03606 | Chma-Chr3:149559754 | transposed | |
| Chma | Chma-Chr2:160577882 | Chma3g03606 | Chma-Chr3:149559754 | wgd |