Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chma7g07307	ATGGCACAAAGTATCGGTCTTTCCAATTTATCTCCCGATGTTTTGCCTGATCTCGCCAACGATATCGAATACCGTGTTCGCGAGATCATGCAGGAAGCTATAAAAGTTATGCATCATGGTAAGCGAACTGTCTTGACTACAGAGGATGTGGATAACGCCCTCCAATTTAGAAAAATGGAGCCAATATATGTTGCAACTGGGAATTCTCTGCGGTTCAAAATGGCTGGTAGGCATAAGGATTTGTTTTATATCGAAGACAAAGATGTGGAATTTAGAGAGGTGATTGAAGCGCCTCTTCCAAAAGCGCCGTTAGATACTGCAGTTGTCGGTCATTGGCTGGCTATTGAAGGTGTACAACCTGCTATTCCTGAAAACCCTCCGCTTGAAGTACTCTTAGCACCATCTGAAAATAAGAAGCCTGATTCCAAAGAAGATGGGGTGTCTAATGATGTTAAAACTCCTGTGAAACATGTGCTCTCGATAGAGCTCCAGCTTTACTTTGAAAAGATCACAGATGTCACTGTAAGTCGGTCAAACTCGATCATCTTTGACAAAGCATTGATGAGCTTGGCGACCGATGCAGGGCTCCATCCTTTGGTTCCTTATTTCATATACTTTGTCGCTGAAGAGGTTACTCGTAACTTAAACAACTTTCAGCTTTTATTTGCTTTGATGCGTCTTGTTCAAAGTCTTTTGCAGAATCCAACCATGAACATTGAACCATATCTGCACCAACTGATGCCGTCTGTAATGACTTGCCTTGTTGCGAAAAGCTTGGGGAATAAGTTCACCGATAACCACTGGCAACTTAGAAACTTCACAGCTAACCTGGTGGCTTTAGTATGCAAAAAGTTTGGGTATGTGTATCATAATCTCCAGTTACGTGTGACTAGGACTCTTCTTCATACTTTCTTGGATCTGGCAAAAACATTTCCGCAGCATTATGGTGCCATAAAAGGGATTACTGCTCTAGGATTAAATGTGGTGCGTATGCTTTTGCTACCAAACCTTGATGCATATCTACAATTTATAGAACCAGAAATGCAACTTGAGAAGCAAAAGAATGAAAACAGGAGGCATGAGGCTTGGAGAGTGCATGGAGCTTTGATGTGTGCAGCGGGTCTATGCATTTACAATCAGCTTAAGACGATTCCCAATCTGTTAGCTCCACCAACACATAGCATCTGGAAGAAAAATGGAAAAGTCGGGACATCAAACCCAAACAAACGAAAGGCAGCGATGATGAACAACATGATGGAACAGCCACTTAAAAAAGTAGCAACAACTGATGGTTCACATCTGGTGAAGGTAGAGATGCAAGGAGGCAACAACGGGTTTTCAATAACTCGTGATGGTGGGATGCATCAGCTACCAAGGTTTATGCCTAATGACAACATGCCAGGAAGCAGTGGCAGGAGGGACAAGTTCGGTGGCGTATCTCAGATGTCATCAGTGGCTGTGTCCCGAGCATGGAAAAAGGAAGTAAATGCTGGTCACTTGCTTCCTAAACTGTATGACGTTTTCGGTCAAAGCATGTTTCCTTTTGTACCTTCCCCAGAATTGTGTAATATACACCTATGA	1581	42.82	MAQSIGLSNLSPDVLPDLANDIEYRVREIMQEAIKVMHHGKRTVLTTEDVDNALQFRKMEPIYVATGNSLRFKMAGRHKDLFYIEDKDVEFREVIEAPLPKAPLDTAVVGHWLAIEGVQPAIPENPPLEVLLAPSENKKPDSKEDGVSNDVKTPVKHVLSIELQLYFEKITDVTVSRSNSIIFDKALMSLATDAGLHPLVPYFIYFVAEEVTRNLNNFQLLFALMRLVQSLLQNPTMNIEPYLHQLMPSVMTCLVAKSLGNKFTDNHWQLRNFTANLVALVCKKFGYVYHNLQLRVTRTLLHTFLDLAKTFPQHYGAIKGITALGLNVVRMLLLPNLDAYLQFIEPEMQLEKQKNENRRHEAWRVHGALMCAAGLCIYNQLKTIPNLLAPPTHSIWKKNGKVGTSNPNKRKAAMMNNMMEQPLKKVATTDGSHLVKVEMQGGNNGFSITRDGGMHQLPRFMPNDNMPGSSGRRDKFGGVSQMSSVAVSRAWKKEVNAGHLLPKLYDVFGQSMFPFVPSPELCNIHL	526

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chma7g07307	526	Gene3D	-	155	360	IPR046344	GO:0006367(InterPro)
	Chma7g07307	526	Pfam	TATA box binding protein associated factor (TAF)	1	54	IPR004823	-
	Chma7g07307	526	CDD	TAF6C	156	372	IPR011442	GO:0006367(InterPro)
	Chma7g07307	526	Gene3D	Histone, subunit A	1	55	IPR009072	GO:0046982(InterPro)
	Chma7g07307	526	SUPERFAMILY	Histone-fold	1	55	IPR009072	GO:0046982(InterPro)
	Chma7g07307	526	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6	1	514	IPR037796	GO:0000124(InterPro)\|GO:0003713(PANTHER)\|GO:0005669(InterPro)\|GO:0005669(PANTHER)\|GO:0006367(InterPro)\|GO:0016251(PANTHER)\|GO:0016251(InterPro)\|GO:0046695(InterPro)\|GO:0051123(PANTHER)
	Chma7g07307	526	Pfam	TAF6 C-terminal HEAT repeat domain	155	337	IPR011442	GO:0006367(InterPro)
	Chma7g07307	526	SUPERFAMILY	ARM repeat	186	383	IPR016024	-
	Chma7g07307	526	SMART	TAF-cls	1	57	IPR004823	-
	Chma7g07307	526	FunFam	Transcription initiation factor TFIID subunit 6	156	352	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chma7g07307	K03131	transcription initiation factor TFIID subunit 6

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chma	Chma-Chr3:93210622	Chma7g07307	Chma-Chr7:251136873	dispersed
	Chma	Chma-Chr5:242629960	Chma7g07307	Chma-Chr7:251136873	dispersed