Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chma7g07327	ATGTCAAAGAGGCAAAAAACAACTTCGCGCCGATCACAATCCAACAACAAGATCATCCACACGTATGGGGCCGACAACATGACATCAAATATTCAATGTACGATGAATATACAAGATTCTGTTGCAGCTGTAGAATCTATTTTAAGGTACAGGTTTTTGGACAAAAGTTTGTTAGAAGAAGCTTTGACACATTCTTCATACACGGAGAGTCAGTCATATCAAAGATTGGAGTTTCTTGGTGATGCTGCTCTTGGGAATGCCATATCGAGTTTTGTTTATTTGGCTTACCCTGATCTTGACCCTGGCCAATTGTCGCTTCTTCGTGCTGCGAATATTAGTACCGAGAAACTTGCGAGAGTGGCTGTGCAACATGGGTTGTATAAGTATGTGAGGCATAATGCAGCAGATATGCTTAGTGATAAGGTTAGAGAATTTGTGGATGTTGTTGAGGGAGAACAAGAGATGGTTGTGCACGGTGGACAAATAAAAGCCCCAAAAGTTTTAGCGGATATCGTAGAATCAGTGGCTGCAGCTGTTTATGTTGATTGTGGGTTCAATTTGCAAAGCATGTGGCTGGTAATCAGAGTGTTACTTGAACCAATAGTAATGCTAAACGTCCTCGAGAAAAAACCGCAGCCTATTACAATGCTGTTTGAGTTATGTCAGAAAGATGGGAAGCATCTTGAAATAAAGCATTGCAGGAAAGTGATTAAATCTCTAGGTGATAGAAACATTGCAAGCGTTTTTGTGGATGGGATATTTATTGCCTCTGGCTCTTCAGAGACCAAAGAGAATGCAAAGCTTCATGCAGCCGAAGCCGCTTTGTCTAAGTTAACAAGGTCCAATAACATCAGCGCAATAGTCCCATATGTAATTGGTGGTTTAAATGAAGCAACTGAAATTGAAGGTGCCAAACAGAAATTACACGAGCTTTGCAACAAGAAACGATGGCCAAAAGCCACTTACAAAATTAAGAATGAGCTGGGACCTGCCCACGATAGAAGATACGCATCATCAGTTGAAATTGATGTTTCCAATAGGGTTTTTATAGTGACGGGAGAAATGAGGTCTAGAGTAAAGGATGCTGAGAATTCTGCAGCCTCGGTGATGTTCTGTGCTTTGCAAAAATATGGATTGATATGA	1143	40.86	MSKRQKTTSRRSQSNNKIIHTYGADNMTSNIQCTMNIQDSVAAVESILRYRFLDKSLLEEALTHSSYTESQSYQRLEFLGDAALGNAISSFVYLAYPDLDPGQLSLLRAANISTEKLARVAVQHGLYKYVRHNAADMLSDKVREFVDVVEGEQEMVVHGGQIKAPKVLADIVESVAAAVYVDCGFNLQSMWLVIRVLLEPIVMLNVLEKKPQPITMLFELCQKDGKHLEIKHCRKVIKSLGDRNIASVFVDGIFIASGSSETKENAKLHAAEAALSKLTRSNNISAIVPYVIGGLNEATEIEGAKQKLHELCNKKRWPKATYKIKNELGPAHDRRYASSVEIDVSNRVFIVTGEMRSRVKDAENSAASVMFCALQKYGLI	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chma7g07327	380	SMART	DRBM-3	304	375	IPR014720	-
	Chma7g07327	380	SMART	DRBM-3	213	279	IPR014720	-
	Chma7g07327	380	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	303	376	IPR014720	-
	Chma7g07327	380	FunFam	Endoribonuclease dicer-like 1	35	205	-	-
	Chma7g07327	380	CDD	RIBOc	56	202	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chma7g07327	380	Gene3D	-	301	376	-	-
	Chma7g07327	380	Gene3D	-	208	286	-	-
	Chma7g07327	380	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	212	280	IPR014720	-
	Chma7g07327	380	ProSiteProfiles	Ribonuclease III family domain profile.	41	184	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chma7g07327	380	SMART	riboneu5	56	207	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chma7g07327	380	SUPERFAMILY	RNase III domain-like	39	201	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chma7g07327	380	Gene3D	Ribonuclease III domain	29	205	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chma7g07327	380	SUPERFAMILY	dsRNA-binding domain-like	303	378	-	-
	Chma7g07327	380	PANTHER	DICER-RELATED	34	352	-	GO:0003723(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)\|GO:0030422(PANTHER)
	Chma7g07327	380	SUPERFAMILY	dsRNA-binding domain-like	166	281	-	-
	Chma7g07327	380	ProSitePatterns	Ribonuclease III family signature.	74	82	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chma7g07327	380	Pfam	double strand RNA binding domain from DEAD END PROTEIN 1	303	375	-	-
	Chma7g07327	380	Pfam	Ribonuclease III domain	74	184	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chma7g07327	380	Pfam	Double-stranded RNA binding motif	213	278	IPR014720	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chma7g07327	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chma	Chma-Chr7:251644919	Chma7g07327	Chma-Chr7:251827654	dispersed
	Chma	Chma-Chr7:251827654	Chma7g08473	Chma-Chr7:289684885	dispersed
	Chma	Chma-Chr7:251707619	Chma7g07327	Chma-Chr7:251827654	proximal