Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chma7g07338	ATGTCCGCATTGATGCTTGGAAAGTTAACTCTTAACAAAGCGGAGCCCACAAATGATGAAACTGTTTTTGACATTGATTCTAAGCATAAAGATCCTCGCATGTCCAAAGGTGACGAAAGACGAAAAAAGGAGAATGCAGAATCACAATTAGACATGCAGCTTGCTCACGAGGTTGACCAGCCAAAATGGCCCGAGAATAGAGTTTTGAAGTCCCATGAGGGTATGTATTTAAATATAATTGACTACATTTTTTATGAGCATAACATTGATATAGAATCCGGATGCCTCAAGAAAGTGAAGTCGTCATTTACTCTATATCCATCAGTCTCTGATGACGTGTCAGATACGTTGAACAATATGAAGATAGTTAGGGCCCTGACATTCATTCCATTTCACCGTACTTGTCGTGCTGCGTTTTCGAGCTTTGCGATTAAGAACGTGACCAAGTCGAATTTCGACACGTCGCTGGCTGACCTTCGAGGGCATGTCTGGGACTCGGATTTTGTGGCGATTGATTTGGAAATGACGGGAGTTACGAGTGCACCGTGGAGGGAGATGTTTGAGTTTGATAGATTTGATGTGCGGTATTTGAAAGTTAAAGACTCTGCTGAGAAATTTGCTGTTGTTCAGTTTGGCGTTTGTCCGTTTCGCTGGGATTCAACCAAGAAGTCCTTTGTTGCGCACCCGCACAACTTTTATATATTTCCACGGCAAGAAGTTGGAGGTGGTGACACGTCTTATGAGTTCCTGTGTCAGACTTCGTCGATTGATTTCTTGGCAAAGTACCAATTTGATTTCAACGTGTGTATAAAAGAAGGAATATCTTATTTATCCAGAGCACATGAGGATGAAGCCAGGTTGCAGTTACATTCAGCACATGAAGATGGGTTGACAGAGTCGCAATGCACAACTAAAGAAATCAAAGACGTTCCGCTGGTCAGAATGGCAGATATTCTTTTTGTGGAGAGAATCAGGAACAAGATCAGTACATGGCATGATGACCTGTTACAGATTAGAAATGGAGGGTCTGGTAGGACATCTCAAGACTCTACTGATTCAGTTAATCAGTTTCAGACCATATTCTTTAAGATGCGTCCAGCTATCAAACTAAATGGATATACTTCCCGCCAACTAAGGTTGATTAAGTCGGTTGTAGAAAAGAGTTTCAAAGATTTAGCTTATATCCGTGTAAATGAAGGTTCGTGTTTTCAACAAATGATTGTCTACACAGACTCCGGAAGGGACCTAGAGTTGCTCATGAAAGAGGTTAAAGGAAATCTTTTGAAGGAAGCAGAGATGAAGATTGGAGCTGCCATCGGCTTCAGGCATGTGATTGACCTTCTTTCCTCTGAACAAAAGTTGATCGTTGGACACAATTGCTTTCTTGATATTGCTCATGTATGTAAAAAATTTGTGGGTCCTCTTCCTTCAAAGCTGGAAGAATATGTAGAGTTAGCTCACAAAAACTTCCCATACATAATTGACACAAAGATCCTTCTAAATGCAAATAACATATTGCAATTAAAGATGAAGAAAAGTAGCACATCACTGGCCAAGGCTTTTGCCATCATGTGTCCACATATTGCTTCTGGTGTCGGCAGTTCTGGTTTGGCTTCATCTGTTGCAGTGGAGGTTCAAGTAGATGATATGATATCATCAAATTGGAACTCCGGTGCCAAGCATGAAGCTGGTTATGATGCTTTCATGACAGGCTGCATTTTCGCCCAAGCATGCAATCATCTTGGTGTTGATATCACCTCTGACTCAACGTTGATGAACGAAGAGAAGCTTAAAAACTACATTAATCTTCTTTACCTCAGCTGGAGTAGTGGAGATATAGTTGACATAAAAACTGGTACAACTACGACAGAATCTTCATCATTTAACAGCTTCAAAACCTCACAAAAGATTATATTTCCAAATATCGTCGTAATTTGGGGCTTCTCATCTAAACTCAAGGCAAGGGAGATAAAAGACTTGATATGCAAAGTTTTTGGGCTGACCTCAGTTACATCAATCTATCACTTGGACAAGACTGCTGTTTTTGTTCAATTTAGCCAGCCAGAATTGGTGTCTGAATTTCTGGAGCTAATATCGCAAATAGAGAAGAAAAAGAACGATGCAATTTATGTTTTGCACCCGCTTTCGGAGCTTTTAGAAGGTGGATCTACCCGTTCTGCTTGTTATGAGGTATACAAGGAAATATGCGCTTCACCAATTTCGAAGGTCTTGTTTGCTGATCAAGCAGAAGCTGTTAATATCAATTTGAACACCAAACTGTTAAAAAGTAAGGCCCACGAAAATGGTTCTTTTGCTAACTTAGAATCCCCGATTGATACAAAGACAGCTGAGACAAAACAACAAATTAAGTCTTCACCCCCTGGCAGCAATGATCCTAGAGGAGAAATGCTAGATATTGTCTCCCGCTGA	2430	40.62	MSALMLGKLTLNKAEPTNDETVFDIDSKHKDPRMSKGDERRKKENAESQLDMQLAHEVDQPKWPENRVLKSHEGMYLNIIDYIFYEHNIDIESGCLKKVKSSFTLYPSVSDDVSDTLNNMKIVRALTFIPFHRTCRAAFSSFAIKNVTKSNFDTSLADLRGHVWDSDFVAIDLEMTGVTSAPWREMFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSTKKSFVAHPHNFYIFPRQEVGGGDTSYEFLCQTSSIDFLAKYQFDFNVCIKEGISYLSRAHEDEARLQLHSAHEDGLTESQCTTKEIKDVPLVRMADILFVERIRNKISTWHDDLLQIRNGGSGRTSQDSTDSVNQFQTIFFKMRPAIKLNGYTSRQLRLIKSVVEKSFKDLAYIRVNEGSCFQQMIVYTDSGRDLELLMKEVKGNLLKEAEMKIGAAIGFRHVIDLLSSEQKLIVGHNCFLDIAHVCKKFVGPLPSKLEEYVELAHKNFPYIIDTKILLNANNILQLKMKKSSTSLAKAFAIMCPHIASGVGSSGLASSVAVEVQVDDMISSNWNSGAKHEAGYDAFMTGCIFAQACNHLGVDITSDSTLMNEEKLKNYINLLYLSWSSGDIVDIKTGTTTTESSSFNSFKTSQKIIFPNIVVIWGFSSKLKAREIKDLICKVFGLTSVTSIYHLDKTAVFVQFSQPELVSEFLELISQIEKKKNDAIYVLHPLSELLEGGSTRSACYEVYKEICASPISKVLFADQAEAVNINLNTKLLKSKAHENGSFANLESPIDTKTAETKQQIKSSPPGSNDPRGEMLDIVSR	809

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chma7g07338	809	MobiDBLite	consensus disorder prediction	772	795	-	-
	Chma7g07338	809	PANTHER	POLY A -SPECIFIC RIBONUCLEASE-TARGET OF EGR1, MEMBER 1	144	752	IPR051181	GO:0000175(PANTHER)\|GO:0003723(PANTHER)\|GO:0005737(PANTHER)
	Chma7g07338	809	MobiDBLite	consensus disorder prediction	17	49	-	-
	Chma7g07338	809	MobiDBLite	consensus disorder prediction	19	49	-	-
	Chma7g07338	809	SUPERFAMILY	Ribonuclease H-like	144	587	IPR012337	-
	Chma7g07338	809	MobiDBLite	consensus disorder prediction	772	809	-	-
	Chma7g07338	809	Gene3D	-	146	312	IPR036397	GO:0003676(InterPro)
	Chma7g07338	809	Gene3D	-	343	618	IPR036397	GO:0003676(InterPro)
	Chma7g07338	809	Pfam	CAF1 family ribonuclease	147	574	IPR006941	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chma7g07338	K01148	poly(A)-specific ribonuclease [EC:3.1.13.4]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chma	Chma-Chr1:208107955	Chma7g07338	Chma-Chr7:252231932	dispersed
	Chma	Chma-Chr2:128868700	Chma7g07338	Chma-Chr7:252231932	dispersed
	Chma	Chma-Chr3:14045269	Chma7g07338	Chma-Chr7:252231932	dispersed
	Chma	Chma-Chr7:204058736	Chma7g07338	Chma-Chr7:252231932	dispersed