Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chma7g07360	ATGGAAGAATCACAAGAGATATTACTAAACTCATTATCATCCGCCGGAGTACCAATCCCGCCGGAAACATATTCCGTCAACGATCTATCACCAGAAACACTAGTATCAATCTGCGGTCATTCTCTTCGTATAATAACCAAATCGGAATCATTTCCGGTGACTTTGCCGGACTCTATGGCTGATCGTTTCAAAATGTGTACGGATCTCTCATCGGCTTTTCAGAACCTAGGGTTTATCGGTGATGTTAGCTTTCATAAGTTCCTGTATCCGTCTGAAGAAGACATGTATAAGCTGATAAGATTTTTGGTTGGGAAGCTCTCTGAGTCGTCTACAACTGCTGTATCACCAGACACAAAGTTCAATAATGCCAATGCAACGGTAAATATTGAGCGTTTGGAACAAACTTCTAGTGATGCTGACCCCGAGGAACGGAATTTGCATACTCAAGTTGAAGATTTAAAACTGAGAACTGATGAAGCTGTATCAAGTTCTATCCAATGTACTGAAGATGTTGCAGCTGAAAGCGGGAATTCGGAAACTAATAAAGTTGGATTTAGTAATATGGAAAATGGCGGAGGTTCGGCAGAGGATACACAGTTGTCAAGGAAGTCTGATGGCGGTAAGGGAGAGACAAATCATCACAGGCAAGAAAATGTGCACTCAGAGGAATTAACTGCGAGGTCATTGGAGTTGCAACAACTTGAAGAGCAAGATGATTTGTTAAAAGCGGCGGTGGAAATGGCTTCCGACAAACAGATGCCTCTGGATTCGTACATTACACAGCTGGGCGAGCAAATAGATGCAAAGAGACATAATCTTGCAAAAATAGAGTCAACATGGAAAGCCACCATAAGGCCTTTAGAAGAGAAGAAACAAAAACTCGAAGAAGCTATGTGCGCGAAACAACCAGATTCTCAGCATAAACATCAAAATTGGAAGAAGCTTGAGCAGGACTTGGTATGCGTATTATCTGAAACAAAGCAAAGGGAAGATGAACTTTCAATTCTGTCAAAAGAAGTTGAGAAACTACCCAAATTGGCTACAAGAAGATCCTATATTGAGCGGATAAAAGAGATTACTAAGAACAGCCGGAAACAGGACATTGACATAGAACGGATTTTAAAAGAGACACGAGAGCTTCAGTTGGAGAGTAACATGATACAAGAACGCTTGCATCGAACTTACGCTGTGGTAGATGAAACACTACTGAGGGAAGCAAAGAAAGACCAAGCAGTAGAGCAAGCTCACAATTTGCTGACAACCATTCATGAGAGTTTCGAAGAAATTACAGAAAAGATCCTTGCGACTGACCGGGCTCGTAGAGAAGCAACGGACCTTGAAACAAAGCTTTCGAGTGTCACTGCACGAAGTTTAAACATTGACAAACTACAAGCAGATCTCGATGCCATTATGAAGGAAAACGAATACCTTCAACGTCGATTGAGTAATTCTTAA	1455	41.44	MEESQEILLNSLSSAGVPIPPETYSVNDLSPETLVSICGHSLRIITKSESFPVTLPDSMADRFKMCTDLSSAFQNLGFIGDVSFHKFLYPSEEDMYKLIRFLVGKLSESSTTAVSPDTKFNNANATVNIERLEQTSSDADPEERNLHTQVEDLKLRTDEAVSSSIQCTEDVAAESGNSETNKVGFSNMENGGGSAEDTQLSRKSDGGKGETNHHRQENVHSEELTARSLELQQLEEQDDLLKAAVEMASDKQMPLDSYITQLGEQIDAKRHNLAKIESTWKATIRPLEEKKQKLEEAMCAKQPDSQHKHQNWKKLEQDLVCVLSETKQREDELSILSKEVEKLPKLATRRSYIERIKEITKNSRKQDIDIERILKETRELQLESNMIQERLHRTYAVVDETLLREAKKDQAVEQAHNLLTTIHESFEEITEKILATDRARREATDLETKLSSVTARSLNIDKLQADLDAIMKENEYLQRRLSNS	484

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chma7g07360	484	MobiDBLite	consensus disorder prediction	201	224	-	-
	Chma7g07360	484	Coils	Coil	460	480	-	-
	Chma7g07360	484	Pfam	CCDC22 protein coiled-coil region	106	454	IPR048348	-
	Chma7g07360	484	MobiDBLite	consensus disorder prediction	170	200	-	-
	Chma7g07360	484	Coils	Coil	231	251	-	-
	Chma7g07360	484	PANTHER	JM1 PROTEIN	214	483	IPR008530	GO:0097602(PANTHER)\|GO:2000060(PANTHER)
	Chma7g07360	484	MobiDBLite	consensus disorder prediction	170	224	-	-
	Chma7g07360	484	Pfam	CCDC22 protein N-terminal domain	1	107	IPR048349	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chma7g07360	K23343	coiled-coil domain-containing protein 22

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chma	Chma-Chr1:14548978	Chma7g07360	Chma-Chr7:253011156	dispersed
	Chma	Chma-Chr7:228318729	Chma7g07360	Chma-Chr7:253011156	dispersed
	Chma	Chma-Chr7:253011156	Chma9g00299	Chma-Chr9:6716325	dispersed