AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g07363 ATGTTCCATTCAGCTCCCACCAGCAAACCACAATCCTCACCACCATCAACCACTGATGAATCACCGCCACCATCACGCTCTAGAAACCCTCAGGTACGTCTAGCACTTTACGTAGCAATGGCACAAGCAGGTTTAGGTTTTGCAATTTTTGTGATATATGGTTTATCCAGATTACTTGAAGAATATTTAAGACCAATATTATGGGCTGTGCTTTGTTCTATACCATTACGTGGTATCCAAGAAACCCTTGTGTCGTTTTGGTCTGAACCGTTAGAAAAAGGTCTAGTTGAAACTATATTAGCTATCCCTTTTTCTATATACAAGATTTTTGTTGGGACACTTGTTGAGATTAAAAATTTCTTGAATAAGCTAGTAACTCGTCGTAAGACTAATACACCGGGTAAGAAACAAAGTGGCTTTTCAGTTTTGGTGAAATGGTTGGTGTCTTTTTGGGTTTTTGTTATGGTTTATGAACTATTTGGTTTGTTTGGTGGTGTCATCTTGTTGGGGTTAGGGTCAATGTTTACTTTTAGTAATGTGAAGTCTAAGATGTCGAGGTTATGGGGTCTTGAGTTAAAAAGTAACGTTTATTCAGTTCTTTTGACTAAAAGAATTTTGATAAGGTTGGAAACTATTGTGGCGATCGGGTTGATTGTAGGAATGATTTTGGGATCTTTTGTTGGGATTGTGTTTTTTTCGTATAAGATTGGGGTTGAAGGGAAAGAAGTTGTTTTTTCAATTAAGTCACATGTTGAAAAGAATAATTACGCTGAGAAAATTGGATTAAAGCAATGGATGGATGATAATAATGTTCCAGAAATGGTGGATAGGTATACTACTAAGTTATATGAAACAGTAAACGAACATGTTGATAGTTTAGCAGTGGAGTATAACGTGACAACCTTAAACCCGTATACTGAAAAGATATTAAGTTTAAAGAAGGTGGTTATTAATCGTGAATGGTCAGCAATTTATCCAGAAATCAGTGCTATTTTAAACGAGGTACAAGTGAGTAAAGAGGAGATGATTAAGAAAGCGAAAGCAATTGTTTTTCAAGGAACAGATGTGCTACAACGTGTGCTTGCAAGTAGTAAATCGGTAGTGGGTGGTAGTACTAAGCTTGTTGCTATAGTCATCAATTCAATAGTCTCTGGAGCAGCCGGAATTTTGGACTTTGTGTCTCAAGTGATGGTATTCATTGGGGTTTTGTATGCTTTGATAACATCAGATTCTGGCGGTGTTACTGAACACGTAATGCATATGATACCAATGTCGAGATCTGCTAGGACAAGATGTGTTGAGGTTCTTAATAAAGCTATTTCCGGGGTTCTTTTGGCATCAGCAGAGATTGCGGTATTTCAAGGGTGTCTTACTTGGCTTTTGTTCAGACTATTTAATATTCATTTCTTATACATGTCAACGCTTCTTGCGTTTATCAATCCTTTGCTTCCGATTTTTCCGTTCTTTTTCTCCACGATCCCAGCAGCATTGCAGTTAGTACTTGAAGGTAGATATGTTCTTGCGGCTTGCTTGTCGATTCTTCATTTTTTGCTTACAGACTATGGTACTGCCGAGATCCAAGAGAGTATCCCTGGTTATAATGCGTATCTCACTGGTCTTAGCATCATTGGTGGAGTGGCATTGTTCCCATCTGCAATGGAGGTACATACCTAA 1674 37.99 MFHSAPTSKPQSSPPSTTDESPPPSRSRNPQVRLALYVAMAQAGLGFAIFVIYGLSRLLEEYLRPILWAVLCSIPLRGIQETLVSFWSEPLEKGLVETILAIPFSIYKIFVGTLVEIKNFLNKLVTRRKTNTPGKKQSGFSVLVKWLVSFWVFVMVYELFGLFGGVILLGLGSMFTFSNVKSKMSRLWGLELKSNVYSVLLTKRILIRLETIVAIGLIVGMILGSFVGIVFFSYKIGVEGKEVVFSIKSHVEKNNYAEKIGLKQWMDDNNVPEMVDRYTTKLYETVNEHVDSLAVEYNVTTLNPYTEKILSLKKVVINREWSAIYPEISAILNEVQVSKEEMIKKAKAIVFQGTDVLQRVLASSKSVVGGSTKLVAIVINSIVSGAAGILDFVSQVMVFIGVLYALITSDSGGVTEHVMHMIPMSRSARTRCVEVLNKAISGVLLASAEIAVFQGCLTWLLFRLFNIHFLYMSTLLAFINPLLPIFPFFFSTIPAALQLVLEGRYVLAACLSILHFLLTDYGTAEIQESIPGYNAYLTGLSIIGGVALFPSAMEVHT 557
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g07363 557 PANTHER TRANSMEMBRANE PROTEIN 13 549 IPR002549 -
Chma7g07363 557 MobiDBLite consensus disorder prediction 1 15 - -
Chma7g07363 557 Pfam AI-2E family transporter 324 512 IPR002549 -
Chma7g07363 557 MobiDBLite consensus disorder prediction 1 28 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g07363 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr7:253094984 Chma8g05155 Chma-Chr8:184001849 dispersed
Chma Chma-Chr7:253094984 Chma7g07364 Chma-Chr7:253107382 tandem