Gene detail

AGRP Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chma7g07417	ATGTCGTTTCCGATTTTTGATGGAAACATTTACATATCAATCAGGACTCCTTATCTAAAGGAAAAAGAAGACGATTCACCCACTTCGGATGAGGTGAATAGCAATATCATACCATCTGCGTCTGTGCTTAGGCAGCTGGCTATAGGTGTTGAGACCACAAAAGTTATAAAGTCAATGAAGGATCTGATAATAGTATCAAGAGATTCTTCACCTGTGAAGGAGAGATCTGGGTTGAGCTTATCCGCTGTAAAGTCGTTTGTGGTGGGGGATAGAGATGATAAATTTGCTCTTGAGTTCGGTCGTGATGAAAAAGTAATGTCTTTTATCCAGTCACTGCAGAATCCAGAAGGTAATCTTTCTCGAAAGAAGACTGGGTCCCTCTTTGAGACGTATACGAGCATTACGAATTTTGCCAAAGAGCTTCATGGTGCTCCTCCTGAGAACTTTGTTACAGAGCTGGCTGAAGCCGTTGGAAGCTTAAGAACTTTGAAGAAAATGGCATTGTTTTGGTCCTGGGTCGTCGAAGAATTGAGAAGGCTATGGAGTGAAGGACAACATATTCCTGGAATCCCTGAAGATAGATTTCCAGATTTAAATTCCTGTTTGTTATATCAGCAGTTGCAGGTTATAAATTGCTGTATATCTAGAAAACGCCGACGTGCTATTGTCACCGAATCATTAGAAGCTGTTTTAAAGCAAGCTAAAAATAACGCTGACAAGTCACCTCCTGGAGGAAATACGGAAAACCCTCTTCTGTATGCTAAAGATAGCTCTGGTGAACATTTGCTTCGATTAGGAGTAGCCAAACAGCTTGAGAACACGACACTTTTGGATACCGGTGAACCTGTGTATACTCCTGTTTTGCAGGAAGGGCCTTTACTCACGGAAGACGTTATTAAAGAAACAGAGGAATTTGTTTTACGTACCGGAAGCGTTGGTGCGGGCTGCTCTCAGCTTCTCTCGGATATGCAGGCTTTCAAGGCTGCAAATCCAGGGTGCATTTTAGAAGATTTTATTAGATGGCACTCACCCCCTGATTGGACCGAATCATTAACAGATGATGATACTAAAGAATCTGACGATGGGAATATTTCGCCTTCAAGAGGACACCTGAGTATTCGTATGCGGAAAGCAGGTAATTTGTGGCGAGAACTTTGGGAAACTGCAAAACCGATACCTGCTGTTAGACAGTCACCACTATACTACGAGGATTTATCTGTGGAAGGGATTCTGCATGGCTTTGAGAATATCTCACCTTCTGGTTTCTTTGAGCAGCTCTTTCTTTCTCTTCTCAGTTCTGGATGTGCAATTGCTGAGGCCAGAATATCGAGTAATGAATATCTGTACAGCCTGTTCAAGGAGTCCAAAGACTATATCATAATTACCTGTCAAGGTAAAAATTGGGTCGAGAAAGCGCAAGAGATATGCCAGGTCTATGAGACGGTGACAGTGATGGCATTGAACCCAGATCTGGTTATAAGGCTCACGAAGCCGAAACATGATCAAAATCCTGCAAGCGTCTTAGAAACACAATCAGAGGACCCAAAGAGCCAAAAAGACAGTCCTACAACAGTACTATCCCCCACAATGTTTTCAAAGAAGCCACCCAAACCTACATCCCCTAATGAGAAACAAGTTGGTTTCTTTGATAATGAACTGATAGCAGATGCGGTCCTGCCCTTCAAAATATTGTAG	1695	42.48	MSFPIFDGNIYISIRTPYLKEKEDDSPTSDEVNSNIIPSASVLRQLAIGVETTKVIKSMKDLIIVSRDSSPVKERSGLSLSAVKSFVVGDRDDKFALEFGRDEKVMSFIQSLQNPEGNLSRKKTGSLFETYTSITNFAKELHGAPPENFVTELAEAVGSLRTLKKMALFWSWVVEELRRLWSEGQHIPGIPEDRFPDLNSCLLYQQLQVINCCISRKRRRAIVTESLEAVLKQAKNNADKSPPGGNTENPLLYAKDSSGEHLLRLGVAKQLENTTLLDTGEPVYTPVLQEGPLLTEDVIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFIRWHSPPDWTESLTDDDTKESDDGNISPSRGHLSIRMRKAGNLWRELWETAKPIPAVRQSPLYYEDLSVEGILHGFENISPSGFFEQLFLSLLSSGCAIAEARISSNEYLYSLFKESKDYIIITCQGKNWVEKAQEICQVYETVTVMALNPDLVIRLTKPKHDQNPASVLETQSEDPKSQKDSPTTVLSPTMFSKKPPKPTSPNEKQVGFFDNELIADAVLPFKIL	564

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chma7g07417	564	MobiDBLite	consensus disorder prediction	503	530	-	-
	Chma7g07417	564	MobiDBLite	consensus disorder prediction	349	368	-	-
	Chma7g07417	564	Pfam	Rab3 GTPase-activating protein catalytic subunit	264	415	IPR026147	-
	Chma7g07417	564	PANTHER	RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT	33	514	IPR045700	GO:0005096(PANTHER)\|GO:0005096(InterPro)\|GO:0043547(InterPro)\|GO:0043547(PANTHER)
	Chma7g07417	564	MobiDBLite	consensus disorder prediction	503	545	-	-
	Chma7g07417	564	MobiDBLite	consensus disorder prediction	349	364	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chma7g07417	K18270	Rab3 GTPase-activating protein catalytic subunit

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chma	Chma-Chr3:112130813	Chma7g07417	Chma-Chr7:254750941	dispersed
	Chma	Chma-Chr5:175259345	Chma7g07417	Chma-Chr7:254750941	dispersed
	Chma	Chma-Chr7:94150749	Chma7g07417	Chma-Chr7:254750941	dispersed
	Chma	Chma-Chr7:254750941	Chma8g05408	Chma-Chr8:190974396	dispersed