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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g07556 ATGAAGATTTTGATCTCAGTTCTGCTTCTGCTAATTTGCATCTCCTCTACTTGTTCTTCGTCACCACTTTCAATTTCAGATGGTGTATTTGGGTCTGAATCTTCAATTGGGCGAAACCTCCTTCAGGCTAAGAAACCATGTCCTGTAAACTTTGAGTTTATGAATTACACGATCATCACAAGCCAGTGCAAAGAACCAAGATACCCTGCTAAGTTATGTTGTGATGCTTTCAAGGACTTTGCCTGCCCTTATGCTGAAGAATTGAATGACTTGTCAAACGAGTGTTCAACAACAATGTTCAACTACATCAACCTCTACGGGAAGTACCCACCTGGCCTCTTTGCTAACTTATGCCAAGATGACAAACTAGGCCTTGTCTGTCCTGCTTTAGCACCTGGATCAGGAAAGAACAGTGTTGGAGATTCTAACAACGGCCACAACATTCCATCTATACTGCTGACATTATCCGCGGGATTCCTAGCCTTCGTGTTTCGGTGGTTTTAA 504 42.66 MKILISVLLLLICISSTCSSSPLSISDGVFGSESSIGRNLLQAKKPCPVNFEFMNYTIITSQCKEPRYPAKLCCDAFKDFACPYAEELNDLSNECSTTMFNYINLYGKYPPGLFANLCQDDKLGLVCPALAPGSGKNSVGDSNNGHNIPSILLTLSAGFLAFVFRWF 167
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g07556 167 PANTHER GPI-ANCHORED PROTEIN LLG1-RELATED-RELATED 7 164 IPR039307 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g07556 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr7:259581502 Chma8g02595 Chma-Chr8:119465672 dispersed
Chma Chma-Chr7:259579880 Chma7g07556 Chma-Chr7:259581502 tandem