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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g07640 ATGACGGTGTACATGAACCGCTTATTCCGGAAATCAAACTCCTCATTTCTGTTATCATCAGGCAAAGCCATAACATCCAAAGTCACACGTCTTAAAGATGACAACACTTTTTTAATCTCAACTGGTATCACCCCACCAAAAATCACACCTTCTGACCAGCTGTTACTACCCAAAAACAGTGACGTCACTAGCTTTTATAACAATGTTGGGTTTATGCAACCTTCGTCGAATGAGTCTTTGCCCAAGACCCAGATGCTGGAAAGGCTTTTTATGGACTTAGTTGCAGGTGATGATAGTATTAAGGAACGTGCATTGGGTCGGTTTAATGATATTGTTGGTGGGAGTATGGAGACTGTTCCTGGTGAAGCGAGTATTTTGATGCCGAGGAGGTTTAGGCAGTTTCAGGCGTGGAATGAATTGAAGAAGATATGGCAAGGGAATAAGAAGGTGAAGGGGTTCTTGATGGAGAAAGTTAGGGGTGGGTATAGTGTTGCGATTGCGGGATATATTGCATTTGTTCCATTTAGGCCGTATGTTGAACGGAGGAATTTGGGGAGTGATAAGTTCACTGTTGAGTCGATTAACTCAAAAAGGAAGAAGATTACTGTGTTTTGA 615 42.11 MTVYMNRLFRKSNSSFLLSSGKAITSKVTRLKDDNTFLISTGITPPKITPSDQLLLPKNSDVTSFYNNVGFMQPSSNESLPKTQMLERLFMDLVAGDDSIKERALGRFNDIVGGSMETVPGEASILMPRRFRQFQAWNELKKIWQGNKKVKGFLMEKVRGGYSVAIAGYIAFVPFRPYVERRNLGSDKFTVESINSKRKKITVF 204
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g07640 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1161615 Chma Chma1g00297 Chma-Chr1:5593696 Chma7g07640 Chma-Chr7:261593284
1217304 Chma Chma7g07640 Chma-Chr7:261593284 Chma9g03742 Chma-Chr9:94694677