Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chma7g07717 | ATGGAGTCGATAATAGCTCGAGCGTTGGAGTATACATTGAAATACTGGCTTAAATCATTTACTAGAGATCAGTTTAAGCTACAAGGCAGAACTGTTCAGCTTTATAATCTAGATATAAATGGTGATGCCTTGCACGCGAGCCTCGGGTTGCCTCCGGCTTTGAATGTTAAAACCGCGAAGGTCGGCAAGCTAGAGATAATACTCCCTTATTTGAGCAACGTACAAGTGGAGCCAATTGTTGTGCAAATCGATAAGCTTGACCTGGTGTTGGAGGAAAATGACGATTTGGATGCATATAAAAGTACAGAGAGTGCACAAACGCCATCCAGTCCAGCAAAAGGCAGTGGATATGGATTTGCGGACAAGATTGCAGATGGCATGACATTGGAAGTACGGACTGTCAATCTTTTAGTGGAGACTCATGGGGGTGCTAGACGTCGTGGAGGAGCAACTTGGGCATCACCGATGGCATCTATTACTATCCGCAACCTTTTGCTTTATACCACAAATGAGAACTGGCAGGTTGTAAATCTTAAGGAAGCGAGGGACTTTTCAAATGACAAGAAGTTCATCTACGTGTTCAAAAAGCTTGAATGGGAACATCTATCCATCGACCTCCTGCCTCACCCTGATATGTTTGCAGCATTTTCTGAGGGTGCATTTAAGGATGACGATGGTGCAAAGCGGGTGTTCTTTGGTGGGGAGCGCTTTCTTGAAGGGATATCTGGGGAAGCTTATATTACTATTCAAAGGACAGAGCTTAATAGTCCACTAGGGTTGGAACTCCAGTTACATATTACTGAAGCCGTGTGCCCAGCTTTGAGTGAACCAGGATTAAGGGCTCTTCTTCGCTTCTTTACTGGATTTTATGTCTGTCTGAATAGAGGCGATGTCAATCCAAATGCTCAAGAGCGATCAGCGGAAGCTGCAGGGCGCACACTAGTCTCCATTATGGTGGACCATATATTTTTTTGCATCAAGGATACTGATTTCCAGTTAGAACTTATGATGCAGTCACTTCTCTTTTCTCGGGCAAGTCTTTCTGACGGAGAAATCGCCAAATGCTTGACACGGGTGATGATAGGTGGAGTATTTCTGCGGGATACTTCCTCTCGCCCACCATGCGCGTTAGTGCAACCGTCAATGCAGGATGCCGCAGAGGAACCGCTGAAGATTCCAGATTTTGGAAAAGATTTCTGTCCTCCAATATATCCATTAGGGGATCAGCAATGGAAATTGAGTGACCGCGTTCCACTCATATCCCTTCATTGTCTTCAGTTTATCCCCTCACCTACCCCGCCATCGTTTTCTACACAAACTGTCATTGACTGCCATCCTCTTATGATACATCTACAAGAAGATTCCTGTCTAAGAATATCATCTTTACTAGCTGATGGAATTGTGGTTAATCATGGTGATATTTTACCAGATTATACTGTCAACTCCCTTGAATTGAAAGTCAAAGGTTTAGATATCACTGTTCCAATGGAAAATCAGAACGAGAGCTCCTTCAATGGAGCAAGACTTCATATTGAGAACCTATTCTTTCATGACTCCCCTTCCCTGAGGCTCAAGCTGCTCAATCTTGACAAAGATCCTGCATGCTTCTGTTTATGGAAAGGACAACCCATTGACGCCGGCCAAAAAAAATGGACAAGTGGTGCTTCTCTTATTAATATGTCTCTAGAAACGTGTAATAATTCAAAAGGAGTTAATGGGCCCCGTTCACACTCTTCGGAATTATGGAAATCTGTTGAGATAAAAGGTGTTTGTGTTCAAGTAGCAATGGTAACAGCAGACGGAAGCCCGTTAATAGAAATCCCACCTCCAGGAGGAGTTGTTAGGGTAGGAGTCGCTTGTGAACAATATCTGTCCAACACTTCCGTGGAGCAACTGTTTTTTGTTTTGGATCTTTATACGTATTTTGGTACGGTCGGTGAGAAAATGGCATTGGTTGGAAAAAATAAACAAAAGAAGGTGGTGAAGCGTGAGCTCTCTAATGGAAACCTGATAGAAAAGGTTCCTGGTGATACTGCTGTTAGTTTAGTAGTTAAGGACCTAAAGCTAACATTTCTAGAATCTTCCTCCATGGATATTCAGGGAATGCCTTTAGTTCAGTTTGTTGGGGAAGATCTGTTCATGGAAGTTACTCATAGAACCTTGGGTGGTGCCATGGCCATTTCGTCAACTTTAAAGTGGGACAGAGTTCAGGTGGAGTGTGCAGAAACTGAGATAAGCTCGGTACATACGAATGGTGTAGTTGTGAATGCTACCGAAGATTTTGTTCCTGTTCAAAATGGCTGCCCAAAACTGAGAGCTGTCTTTTGGGTGCAAAATGGAAGTAACTTACCATTTGTGAATTTACGTATGGTGCATGTTATTCCGTATAATGCACAGGATACAGAGTGTCATAGTTTAAGTGTTTCGGCTTGTATTGCGGGTGTGCGCCTTGCAGGAGGAATGAGTTACGCTGAAGCTCTTCTTCACCGATTTGGAATTTTAGGACCAGATGGTGGGCCAGGGGTTGGGCTCTCCAAGGGTTTGGACCATTTATCTGCGGGCCCATTGTCGAAACTTTTCAAACGATCACCTCTGCTTGTAGAGAACGTCAGGGAGAGTAAAAGTGAAAGCGTAGAGGAGGAGAATCATATTGGTAACTTGCACTTGGGTGCACCAGATGATGTAGATATATCACTAGAATTGAAGGACTGGTTATTTGCACTGGAGGGTGCAGATATGGCAGAAAAATGGTGGTTATATACTTCAGAGGATTCTTACAGAGAAGAGAGGTGCTGGCACACAACTTTTGACAGTATAAAAGCTAAGGCAAACAGCAGCAAAAAGTCCTTGGTGAATGGAAAAAAGAATTTTCCTGGCTCAAAGAAGTATCCTGTCGAATCAATTACGGTTGGTATTGAAGGCTTAAAGACGCTAAAACCCCAGCAGCAGAAGGGAACTGCACCTCAGAACGGGCACAAGCAAATTGTTGAGTCACATGGTGGTGTAGATTTTGAAGCTGATATAGTCTTGAATGAAGATGATGATGTAGATGGGATGATCAAATGGGTCTTGGAAAGTTTAAAATTTTCTGTGAAACATCCGGTTGAGGCAGTTGTAACCAAGGATGAACTGCAACATGTTGCTCAACTATGCAAGTCAGAAGTTGATTCCATGGGGCGAATAACTGCAGGAGTTTTACGTGTGTTGAAGTTAGAAGGATCTGTTGGTCAGTCAGCAATGAATCAACTAAGCAACCTTGGAAGTGAAGGGTTTGACAAGATCTTCTCGCCAGAGAACCCGCGCAGAGATAGTACTGCTTCTAGTGTCGGTATGAGTCCGTTTTCCCTAGTGGCTTCAGATAACCAACATTCTTCGTCATTCAATTCAACATTAAATTCACTCGAGGCTGCATTATTAGAATCACAGACAGATTGTGCAGCTCTTGTCACTGAACTAAGCAGTTCGGAATCTCCGAAACCACACATTCATAGTGTAGAACAACTTGCCCAGAAACTTGAGAGTATGCAGAAATTGTTATTAAAGTTGCAGACTGAGGTATAA | 3561 | 43.19 | MESIIARALEYTLKYWLKSFTRDQFKLQGRTVQLYNLDINGDALHASLGLPPALNVKTAKVGKLEIILPYLSNVQVEPIVVQIDKLDLVLEENDDLDAYKSTESAQTPSSPAKGSGYGFADKIADGMTLEVRTVNLLVETHGGARRRGGATWASPMASITIRNLLLYTTNENWQVVNLKEARDFSNDKKFIYVFKKLEWEHLSIDLLPHPDMFAAFSEGAFKDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLELQLHITEAVCPALSEPGLRALLRFFTGFYVCLNRGDVNPNAQERSAEAAGRTLVSIMVDHIFFCIKDTDFQLELMMQSLLFSRASLSDGEIAKCLTRVMIGGVFLRDTSSRPPCALVQPSMQDAAEEPLKIPDFGKDFCPPIYPLGDQQWKLSDRVPLISLHCLQFIPSPTPPSFSTQTVIDCHPLMIHLQEDSCLRISSLLADGIVVNHGDILPDYTVNSLELKVKGLDITVPMENQNESSFNGARLHIENLFFHDSPSLRLKLLNLDKDPACFCLWKGQPIDAGQKKWTSGASLINMSLETCNNSKGVNGPRSHSSELWKSVEIKGVCVQVAMVTADGSPLIEIPPPGGVVRVGVACEQYLSNTSVEQLFFVLDLYTYFGTVGEKMALVGKNKQKKVVKRELSNGNLIEKVPGDTAVSLVVKDLKLTFLESSSMDIQGMPLVQFVGEDLFMEVTHRTLGGAMAISSTLKWDRVQVECAETEISSVHTNGVVVNATEDFVPVQNGCPKLRAVFWVQNGSNLPFVNLRMVHVIPYNAQDTECHSLSVSACIAGVRLAGGMSYAEALLHRFGILGPDGGPGVGLSKGLDHLSAGPLSKLFKRSPLLVENVRESKSESVEEENHIGNLHLGAPDDVDISLELKDWLFALEGADMAEKWWLYTSEDSYREERCWHTTFDSIKAKANSSKKSLVNGKKNFPGSKKYPVESITVGIEGLKTLKPQQQKGTAPQNGHKQIVESHGGVDFEADIVLNEDDDVDGMIKWVLESLKFSVKHPVEAVVTKDELQHVAQLCKSEVDSMGRITAGVLRVLKLEGSVGQSAMNQLSNLGSEGFDKIFSPENPRRDSTASSVGMSPFSLVASDNQHSSSFNSTLNSLEAALLESQTDCAALVTELSSSESPKPHIHSVEQLAQKLESMQKLLLKLQTEV | 1186 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chma7g07717 | 1186 | Pfam | VPS13-like, N-terminal | 1 | 104 | IPR026854 | - | |
| Chma7g07717 | 1186 | PANTHER | UNCHARACTERIZED | 1 | 1183 | IPR026728 | - | |
| Chma7g07717 | 1186 | Coils | Coil | 1165 | 1185 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chma7g07717 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 44135 | Chma7g07717 | Chma8g05604 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1175704 | Chma | Chma2g05232 | Chma-Chr2:179646198 | Chma7g07717 | Chma-Chr7:264051351 | |
| 1217357 | Chma | Chma7g07717 | Chma-Chr7:264051351 | Chma8g05601 | Chma-Chr8:195651600 |