Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chma7g07804 | ATGCCTACATCAGATCATTGTCGCACGCATTCTGTTGGAAAGCAGTGGCGGTTATGTCCATTTTGGCAATCCGGAACACCCTCTTCATCTTCATCGCCATCGCCAACACAGAATCTTCAACCTCAGAGCGCGAAAAGCTACCAAAATGGTGTAGTGTCAAATAGTCAATCTTCAAGTAAGGTGTCGTTGGTGGCAAAAACGATTTTACCCGCTAGAAGAAGGCTCAGGCTTGACCCATCTAACAATCTTTACTTTCCGTATGAGCCAGGAAAACAAGTAAAAAGTGCTGTTCGTATCAAGAACCAGAGCAGCTCTCATGTTGCTTTTAAGTTTCAAACAACCGCGCCTAAGAGCTGTTATATGCGACCTCCTGGTGGTATACTCGCTCCTGGTGAAAGCATTATTGCTACAGTTTTCAAATTTGTTGAGCAACCGGACAAAAATGAAAAGCAGCCGGACAAAAGGTGCAAGGTTAAGTTTAAGATCATGAGCCTCAAGGTCAAAGAAGGAACCGACTTTGTGCCTGAAATGTTTGATGAGCAAAAGGATGAAGTAGTTATTGAGCGAATCTTACGTGTTATTTTCCTGAATGCAGAGCGCCCTACCCCTGCATTGCAAAAACTAAAGCATCAGCTGGCCGAAGCTGAGGTTGAATTAGAATTACGGAAGAAACCTCAAGTGGATACAAGTCCTAAGGTTGTTGAGAAGGGTCTAGTTATTGATGAGTGGAAAGAACGAAGGGAAAAATACCTTGCTCGACAAAAAATTGAGGCTGTAGATTTGATGTGA | 789 | 43.22 | MPTSDHCRTHSVGKQWRLCPFWQSGTPSSSSSPSPTQNLQPQSAKSYQNGVVSNSQSSSKVSLVAKTILPARRRLRLDPSNNLYFPYEPGKQVKSAVRIKNQSSSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEQPDKNEKQPDKRCKVKFKIMSLKVKEGTDFVPEMFDEQKDEVVIERILRVIFLNAERPTPALQKLKHQLAEAEVELELRKKPQVDTSPKVVEKGLVIDEWKERREKYLARQKIEAVDLM | 262 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chma7g07804 | 262 | Gene3D | Immunoglobulins | 70 | 199 | IPR013783 | - | |
| Chma7g07804 | 262 | SUPERFAMILY | PapD-like | 65 | 205 | IPR008962 | - | |
| Chma7g07804 | 262 | MobiDBLite | consensus disorder prediction | 24 | 53 | - | - | |
| Chma7g07804 | 262 | Pfam | MSP (Major sperm protein) domain | 75 | 181 | IPR000535 | - | |
| Chma7g07804 | 262 | PANTHER | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN | 75 | 255 | IPR016763 | GO:0005789(InterPro)|GO:0005789(PANTHER)|GO:0005886(PANTHER)|GO:0061817(PANTHER)|GO:0090158(PANTHER) | |
| Chma7g07804 | 262 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 74 | 196 | IPR000535 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chma7g07804 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chma | Chma-Chr7:267377552 | Chma9g07249 | Chma-Chr9:242715460 | dispersed |