Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chma7g08112 | ATGGGTTCTTCCTCATCATCACAGAAACCAGAGTCTACTACTCAAGGGGGTGGAAACACCGATTTTAAATCTGTTAGTGATCAAGAATGGAAAAGTAAGCTTACCGGAGAACAGTTTTACGTAACTCGACAAAAGGGGACGGAAAGGGCCTTTACTGGGGAATACTGGAACACCAAAACTCCTGGGACTTACCATTGCATTTGTTGCGACACTCCACTATATGAGTCATCGACCAAGTTTGATAGTGGAACTGGTTGGCCATCGTACTATCAGCCAATAGGAGACAATGTGAAGACAAAGTTAGACCTATCTATCATTTTCATGCCTCGACAAGAAGTTGTATGTGCAGTTTGTGATGCTCATCTTGGTCATGTATTTGACGATGGTCCTCCACCTACTGGGAAACGTCATTGCATCAATAGGCATTGTTTCCCTCAAGTTGAAGCCAAAGTAGGGAAAAAATTCAGGAACTTGAGCCAACAATACGTCAACAAGAAATTTTGGTTTTTTTGTTCTTGTACTCTTTCTATCTTTTTGTATTGTAAATGGTCAAGTCTTGATGTTTATACAGAGACATGGATGTGCTAG | 588 | 40.99 | MGSSSSSQKPESTTQGGGNTDFKSVSDQEWKSKLTGEQFYVTRQKGTERAFTGEYWNTKTPGTYHCICCDTPLYESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPRQEVVCAVCDAHLGHVFDDGPPPTGKRHCINRHCFPQVEAKVGKKFRNLSQQYVNKKFWFFCSCTLSIFLYCKWSSLDVYTETWMC | 195 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chma7g08112 | 195 | Gene3D | Peptide methionine sulfoxide reductase. | 17 | 162 | - | - | |
| Chma7g08112 | 195 | PANTHER | METHIONINE SULFOXIDE REDUCTASE | 14 | 142 | IPR028427 | GO:0005737(PANTHER)|GO:0006979(InterPro)|GO:0016671(InterPro)|GO:0030091(InterPro)|GO:0033743(PANTHER) | |
| Chma7g08112 | 195 | FunFam | Peptide methionine sulfoxide reductase MsrB | 19 | 152 | - | - | |
| Chma7g08112 | 195 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Chma7g08112 | 195 | ProSiteProfiles | Methionine-R-sulfoxide reductase (MsrB) domain profile. | 27 | 149 | IPR002579 | GO:0033743(InterPro) | |
| Chma7g08112 | 195 | Pfam | SelR domain | 29 | 142 | IPR002579 | GO:0033743(InterPro) | |
| Chma7g08112 | 195 | SUPERFAMILY | Mss4-like | 25 | 146 | IPR011057 | - | |
| Chma7g08112 | 195 | NCBIfam | peptide-methionine (R)-S-oxide reductase MsrB | 25 | 147 | IPR002579 | GO:0033743(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chma7g08112 | K07305 | peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chma | Chma-Chr7:276677012 | Chma7g09596 | Chma-Chr7:316524867 | dispersed |