Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chma7g08150 | ATGTGTCACGTGTCATACGCAGAAATACAATTGATTACTCTTCATTGGCCTACATTAAGCTTTTCCAGATTCTTTGGCCGTGATTCTGCACTTGATACCAGCGTCGCAAAAATTGTGATCGATCTTGAAGAATGTCCAATTTGTTTCTTGTATTATCCAAGTTTGAATAGATCAAGATGTTGCACGAAAGGCATTTGCACTGAGTGTTTTCTCCAAATGAAGACACCGAATTCTACACGGCCTACGCAATGTCCGTTTTGTAAAACGTTGAATTACGCCGTGGAGTATAGAGGCGTGAAGAGTAAAGAGGAAAAGGGGCAGGAGCAAATTGAAGAACAAAGGGTGATAGAAGCAAAAATAAGAATAAGACAACAAGAAATTCTAGATGAAGAGGAAAGAATGATAAAAAGGCAAGAGATGAGCTCTTCAAGCGGCATAATTGAACCTAACGAGACTGAATATTTCTCCAGAGCAGCAACATCTTCTTCTGAAAGTGAGGAAATTGTGTCTGCTCCACAGCCGAGTGGCACAGAAATTCGACATCCTGTGCGCTCTAGGGAGAACAGAGATGATGAATTTGACCTTGATCCTGAGAACATAATGCTTATGGAAGCCATCTGGTTGTCCTATCAGGAGGATAACAAGCACCAACACCATAACCCAAACTATGGCGACGCTGCACAACTAGCAAAATATGCAACAGAAGTTCGTGTATTAGCATCCATGGCTCCGCAATCCGACATGGCATCAGCATCTTCATCCTCATCACCTTCTGGAGGTCTAGCATGCGCTATAGCCGCACTAGCCGAACGCCAACAAACAGGAGCAGAATCATCAACTAATTACAATAACTACGGCGTTAATACCTCAACATACAACATACATCCCGACCATAGCTCAACCGGGTTGTCACTTAATAACCATCTGCAAATAAGCAGACAAGAACATGAATCATGGGGTGAAAATGTAGTTGAACCTGAAACTGGTTATGGGTATGATCATTATGATGATGTCCACAGAGGAGGACAATTCGTGCAACAAGATGAGAATATAGTTCCTGAAAGCTTTGAAGAGCAGATGATGTTAGCTATGGCGGTTTCGTTGGCAGAGGCTCGAGCTAGGACTAGTAGTAGTACCCCAGAAGTTGCTTGGATTTAG | 1158 | 42.66 | MCHVSYAEIQLITLHWPTLSFSRFFGRDSALDTSVAKIVIDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKSKEEKGQEQIEEQRVIEAKIRIRQQEILDEEERMIKRQEMSSSSGIIEPNETEYFSRAATSSSESEEIVSAPQPSGTEIRHPVRSRENRDDEFDLDPENIMLMEAIWLSYQEDNKHQHHNPNYGDAAQLAKYATEVRVLASMAPQSDMASASSSSSPSGGLACAIAALAERQQTGAESSTNYNNYGVNTSTYNIHPDHSSTGLSLNNHLQISRQEHESWGENVVEPETGYGYDHYDDVHRGGQFVQQDENIVPESFEEQMMLAMAVSLAEARARTSSSTPEVAWI | 385 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chma7g08150 | 385 | MobiDBLite | consensus disorder prediction | 159 | 192 | - | - | |
| Chma7g08150 | 385 | PANTHER | PROTEIN SIP5 | 41 | 283 | IPR039301 | GO:0005737(PANTHER) | |
| Chma7g08150 | 385 | ProSiteProfiles | Zinc finger RING-type profile. | 45 | 88 | IPR001841 | - | |
| Chma7g08150 | 385 | SUPERFAMILY | RING-U-box | 44 | 93 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chma7g08150 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chma | Chma-Chr5:237189377 | Chma7g08150 | Chma-Chr7:278096440 | dispersed |