AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g08218 ATGCTCCTATCACCAGGCCACTCTCCACGGCGTCTATCATCTCCGTCACCGTCACAAACACCGTCACACACACCGTCACTTAACGCCGTTAATTCAAACCCTCAAAACCCTAGAAAACGAAACTCATCATCAACAGTGCTTGATGAAGATACATATGTAGCAGCAATTGAGAAAATAATCGAACGTGATTACTTTCCCGACATTCCTAAGCTTCGAGACCGGTTGGATTTGCTCGAGGCGTCTCGAACGGGCGATCCGATGCTTATTCGCGACGCGCAGTTGAAGATTATTGAGCGGCGGTCCGGGAAAACTGCGGGTAGTGATACGGCTGGTAAGTTTCGCACGCCTGGGTCCACTTTTTTTAGAAATAGTGTCTCCTTAGGGTTTGATCAAACACCTGTTGAAAACGTAAATGTCGATAAGGAGAAGAGTTCGGTTGATGAGAATGCTGATAGTATGGATGAGTTAACGTTGGACGCGTTTTTTAGACGGTATACGAGTGAGGATAACGAGAGTTTTAGTAAATTGATTGAGAAGGTTAATAAGAGGAAGAAGGAGAGGTATGGGTTTTTGTTGGATGGGGAGAATCGTGGGACGGGTGGTTTGATTGAGGATGTGAAGAAGGATAGGATTACGGATGGGTATGGGACGTCGGATCAGCCTTTGGCGACTTTGGAGAGCTGGAAGTATACTGCTAAGAATTTGTTGATGTATCATCCGGCGGATAGAGGTGAGGTGGCGTTGACGAATGATGAGTTGGCGAATAGGATTAATGGGATGACTAAGGAGATTAGTAAGACGAATACGAGGTTTCATGGGAAGGTGAGTGATTATAGGGGTAGAGAGGATGATGAGGTTTCGGTGATTTATAACCCGGTTGCTGGTGGGACGCCTGTTCCATGGTCTTTGTCAGATAGGGATGGGGATAAGGGGAAGAAGTATGATTTGGAGGAAATGAAGAAGACGCCTAATCCGTTTTATGTTGAGTCAAATAAGAAAGCAGATAATGGGTATAGTTTTGTGAAGACGCCTTCGCCTGCACCAGGTGTGGATGAGTCGCCGTTTATTACGTGGGGTGAGATTGAAGGGACGCCGTTGAGATTGGAAGATGAAGATACTCCTATTGATATTGGTGGTAGTGGAAACGGGCCTCATTTTAATATCCCTCTTCCACCTTCACGGGATTTAAAGGCTCATTCTTTGTCAAGAGACGCTTCTCGGAAACTGAGGGATCGGTCGCTGATGTTTCAGAAACCGCCATTGCATTCTCCGGCTAGAAGTGGTAGTGCTAGTCCTAGTGCGCGAACACTTTCACCTGCTGCACAGAAGTTTGTTAGAAATGCTATTGCCAAGTCTTCTCGTTCGGCTACCGTTGATGAATCACTTCGTGCAAGTTATCGTGGATCGAGTCCTGGGTTAGCTACACCAAAACCTGGAAGGAGTACATCGAGGTTGGCAAGAGATGGTAGCTTGAGTTTGAGGTCGCCGTCTGTAGGGGAGGGCTCTAATCCTCCTTGGTAA 1521 46.68 MLLSPGHSPRRLSSPSPSQTPSHTPSLNAVNSNPQNPRKRNSSSTVLDEDTYVAAIEKIIERDYFPDIPKLRDRLDLLEASRTGDPMLIRDAQLKIIERRSGKTAGSDTAGKFRTPGSTFFRNSVSLGFDQTPVENVNVDKEKSSVDENADSMDELTLDAFFRRYTSEDNESFSKLIEKVNKRKKERYGFLLDGENRGTGGLIEDVKKDRITDGYGTSDQPLATLESWKYTAKNLLMYHPADRGEVALTNDELANRINGMTKEISKTNTRFHGKVSDYRGREDDEVSVIYNPVAGGTPVPWSLSDRDGDKGKKYDLEEMKKTPNPFYVESNKKADNGYSFVKTPSPAPGVDESPFITWGEIEGTPLRLEDEDTPIDIGGSGNGPHFNIPLPPSRDLKAHSLSRDASRKLRDRSLMFQKPPLHSPARSGSASPSARTLSPAAQKFVRNAIAKSSRSATVDESLRASYRGSSPGLATPKPGRSTSRLARDGSLSLRSPSVGEGSNPPW 506
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g08218 506 MobiDBLite consensus disorder prediction 376 506 - -
Chma7g08218 506 PANTHER ES-2 PROTEIN - RELATED 13 496 IPR019148 GO:0071013(PANTHER)
Chma7g08218 506 MobiDBLite consensus disorder prediction 9 46 - -
Chma7g08218 506 Pfam Nuclear protein Es2 44 444 IPR019148 -
Chma7g08218 506 Coils Coil 250 270 - -
Chma7g08218 506 MobiDBLite consensus disorder prediction 448 464 - -
Chma7g08218 506 MobiDBLite consensus disorder prediction 397 415 - -
Chma7g08218 506 MobiDBLite consensus disorder prediction 424 440 - -
Chma7g08218 506 MobiDBLite consensus disorder prediction 485 499 - -
Chma7g08218 506 MobiDBLite consensus disorder prediction 1 46 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g08218 K13118 protein DGCR14
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr3:204011404 Chma7g08218 Chma-Chr7:280696569 dispersed