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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g08226 ATGGGCATAGCCAAGATCGCATACCGAGCAGAACAAGGGTCTCGTGGTTGGGTGGCTTGGGCCATTAACCCAAACCAAATAGGTATGGTTGGGTCAGAGGCAATTGTGGCGTTCCATAACAGTAATGGGGGTATAACAGTTTATCCAACATTGATAACAAGTTACAGCCCGTCAATGCTTCCTGGAGATCTTAGCTTTCGGGTATCGGGTCTTTCAGCTGACTTTGTGAATGGTGAGATAACTATATATGCGACTGTGGGCCCGTTTGCAGGCGGATCCCTTGTGAATCAAGTATGGCAAGCTGGGAATTTGGTTTTGAATGATGTACCGCAAATGCACGATGTTTCTCAACAGAATCTAGAATCAACAGGGGAACTTGATTTCTTGTCTAGTTAG 396 45.71 MGIAKIAYRAEQGSRGWVAWAINPNQIGMVGSEAIVAFHNSNGGITVYPTLITSYSPSMLPGDLSFRVSGLSADFVNGEITIYATVGPFAGGSLVNQVWQAGNLVLNDVPQMHDVSQQNLESTGELDFLSS 131
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g08226 131 Pfam Protein of unknown function (DUF568) 29 128 IPR045265 -
Chma7g08226 131 ProSiteProfiles DOMON domain profile. 1 102 IPR005018 -
Chma7g08226 131 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 4 130 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g08226 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr7:217875283 Chma7g08226 Chma-Chr7:280953496 dispersed
Chma Chma-Chr7:280953496 Chma9g07029 Chma-Chr9:229399808 dispersed