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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g08356 ATGGCAAAGGACAAGCAAAAGATAGTCGTAAAGGTGACGATGGAGAATGACAAAAAGTCTCGTAAGGCTATGAAGATTGCAGTTAGTGTTTCTGGAGTAGAATCAGTGGCTTTTGGTGGATCAAATAAGGAGCAGATCACAATAACAGGAGAAGGAATTGACTCAGTTAAACTAACACACCTGTTAAGAAAACGGGTCGGATACACTGAGCTAGTAAGTGTTGGATTGCTTGAAGAAAAGAAAAAGGAGAAAACTGAAACACCAGGGAGAATCGAGTATGCTTATCCTCATCATTATTATGGCAATAGTCTGCCCATGCAAGTTGTGCATGAAGTCCCTTCCAATCCTTGCAGTATCTTGTGA 363 40.77 MAKDKQKIVVKVTMENDKKSRKAMKIAVSVSGVESVAFGGSNKEQITITGEGIDSVKLTHLLRKRVGYTELVSVGLLEEKKKEKTETPGRIEYAYPHHYYGNSLPMQVVHEVPSNPCSIL 120
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g08356 120 PANTHER OS04G0464100 PROTEIN 6 119 IPR044296 -
Chma7g08356 120 Gene3D - 1 80 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g08356 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr7:285208766 Chma7g08364 Chma-Chr7:285438435 dispersed
Chma Chma-Chr7:284901757 Chma7g08356 Chma-Chr7:285208766 proximal
Chma Chma-Chr7:285208766 Chma7g08359 Chma-Chr7:285241651 proximal