AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g08385 ATGTCATCCCAACCACCAATTGACAACAACAACAACTCAAACACCAAATCCGAACAAGAAACAACCACACTCGCCTTCCACAAAAAACGAGCTCGTCGCGTAAGCTTCGCCGAAAACACATCCGTACACATCTTCAACCGCGACGAAGACTCCGGTACTCCCGTAAACGCGAAACAACCACCGTCTGATGAGAATGAGTATTCTGACGAACCTAAGTTTTGGAATGATAACGATAATGATAATGGAAATGATGAGGATGTGGAGGAGGATGAGGATGAGGATGTGGATATGGAGGATGATATGGATGAATCCGGTGGCTCGAGAAGTCCGTTTTTGCGATTGGTTGGGTCGTCTCCGTCATCCGGTGGGAGTACTTTTGGTTCCGCTACCTCAAATGATGAAGATAATTTTTTTGGTCCTGTATCGACAAACTTCATTAGACGAGATATACTGGACCGTGAAGCTTCTGACGGAAATCATGATCAGACTATGGATTCAACAGCCTTTTCGATGCATTTTCGTAGCATTGCTAGGTCAGACTCAGAAGTGGAGTTGAAGACCTCAACAGGGGTTCACCTTTCCTTTGAGGAGAAAACCCCAAATCAAGATTCTAATCCCACACATACAGGAAGCTTAATGCTTATGACACAAGCTAAGAAGCCAAATCATCAACCTTCGGTTTCTACCTCGAAACTACACACTTCATCCGAGTCTAATGATATGAGTATTGTTGGAGAATATCGTTATAAATATGACTATGGAGAACTATCTCCGACATTGGATGCACTCTTGGCTGAAGGCAATAAGGATTTGCGTGTGATCGCTGCTTCTAAAGATACTATCCTGAAATCACCAAGAATGGTTGCAACAACCGAAGAGTATGGGGCTAACCTCATGGATTTTAGTTGTAGTGAAGATAATAATAATCTAGAAGGGATTATTACTCATGAAATGGTCAATGAAGATGTTGCCCCTAAGCATAATCAGCTTGGTGTGGTCAATGACGGATCAAATATATCTTCCAATAAGGAGATGCCTTTAGATGTCTTATCTGAGGCTGAGAAACATTTGTCCTCTGGTTCTTCTATTTTGGTTACCCCAAATGCTAAGACAACAGATCTTGTCAAAGATGCAGTTCAGAGAAAGTCAAGCTTGGACTTCATGGTTACCAGTCAAAGCAATCCTAATCAACATCAACCTCCTTTTGTAGGGGCAGTGAACTCTTTGACTGATAAGTCTAGTCACATGCATTTCGATGGTGTTAGTCCATCTAAATTACCATCTGCTGTGACTCCTCTTCATAAAAGTGTTTTTGTAAGAACAGATACCCCGAAACATAGTCGGAGTGTTTTATCCATACAGAAAAGCATTTCTAAACTCAAAATGCTAAACGCTTCTCCTTTTTCTGCTGATCTGACTGCTAAACTTGAAGATTCAGCTTCCCGATCTGTACACAGCCCCTCTAAGATGACTCCTAATACTTCGTTGGAAAAAAATCATAAAGTTTCTTTACTTAATTATACGGATGATAGTGGACGATTATCATCAGCTATTCAGAAGAAGAGAGAAAGAGCAAGTTCAACAACTATGGATGATGTTAGATTGCAGACACCAAAGAATGCTGTCCCTGTAACTCATTTGCAAAATGTTGTCAAACTTGCATCACCTTTATTGATACCACCTGAAAGCGCATTGTCTGGAGAAAAGTTGCAGACAGAACTCTTGTCATCGGCGGATATCCGAAATGGTTTTGAATATGATAAAGACAAATCTAATTTACCTCAAAGTTTTGGCTATTCTCCACAGAAGAAGTTAAAGATAGTGAATGCATCAGAATTTAGAAGCAGCCCTCTGAGAGATGCAAAGCAATTTGCCAAACACAATGAACCGGGGGAAAACGTTACTAATGCAAGTCTTTCTGCTATTGCTGCTAACAAGACTGATGCCTTGTGCATTGAGATGTTAGAAATAGATAGTTCGGAAATGTCCACTGAAGAAGAAATGGTGGATATCGGAGAGGTTTCTCTCAGTGAGGCCCGTGGTAACTTAGAAACAAAGGAGAACGCTACAACCATATTGAAGGATGATCAACATGTGCAGATTCAACCTAAGTTTATGGAAAGTGATATTGCCGGGGGAGAGTCCAGACGAGCTTCCCCGCTTTTGGAAGAAAAGACAGATAAACAATCTTGTCAGAAGAATTTGCATGACGAGGTTTGTCAAAGTCCCTCAAATAAACAGCCATATGATGCTAATGTTGATTTCATACCGGCGGAAAATGTACCGTCGCCAAGTCCTCATCGCTTTTCGAATGGAGATATAATCTCTGAGCAGGGAAGAAAGACTATATCTGGGGTGGTTGAGAGAACTGCTAGAACTCAGAGGAGTCCAAATATCCCAAAAAGTCATGTTGGGACCAAAGTCTCAAGTGACAATGAGATATCAACGATTGTACACACTTTTATAAATCCAACTGAGATGACTGCAATGCTCTGTAGAGAAACAAAAGAACTTACACCTCAATCAGCTGATAAGTTCAACTTGCATGCGATTGATTGTCTGACAAGCATCATAGATCAGCTTCTGAAAGCAAAAACGTATCAGCTTCTTTCTGACGAAATCAAATCTCAGAAAAGTGTAGATGCCAGTAAATACATTGCACACAAAAGAGCTGCAGAGATGAAACTACTTGTGTGCAAATTAGTGCATGAGAAAGCAAAGTTGCGGCTACTGAATGTGAAGCGGGAGAGGTTGCTGGAAAGGGTAGAATCAGTTTCCTCCGGTATATTGGAGTCCGAGGAATTAAGGTTGATTTTTCCACCACAACAATCTTCACTTGTCCATAGCAAGTCCTTGTCAGTCAACATGAACAACCTTCATGAGAGCCAGATTGACAGTGACAAAGTGACGTCAATGGAGCAAACAGTTGATCATATCGATAGAAGAATTGCAAACTTGACCAAATCATTTCACAAGTCATGTAAGATGAAGGGAGAACCCAGCGCCCATGACACTATTGCATTTGCTAAAGGTTTTGTGAAGAAGCGAGCATGCTGCCAGATCATACGAAAGGATCTACAGCTTTGGACTGTAGACAATTTTGAGGTGGGAAATGGCTGCCGCAATGTTAATCTCAACTACCTCGACCTGATAACTCAAAGGTTAACAGTCAAAACTGGTCCTGTCCCAAGCATTTCTGTTTCACACGAGTTACATAAAGCGAACATCAGCAAGATCTTCAATGACATGGATGCTTGTGCTGCATTCGAATTTGTCTTTTATGCTGGAATGATGCAGAAGCATGCCGATGCTACAAGCTTAGCTCAAGCAACTCAAGTGACTGGTTCTCGTTTGGGCAGTTTGTTAGATGTGTTGGAAGAGATGCAACATGCAAGAATAGAGCCAAAAAACTTGATTTCTGCAAGATTTCACACACCCAAAGCTGAGCAACTTGACATTGAACTCTGCTTTTTTGATTCAACACATCGTAGGAAGGCAACAGTTACATTAGACGCATCATGTTTGGCAAGGGGCATCTATCCTTCAGAAATTGTACCGTATCAGGTTGACATTCCTATTGATGAGCCACAAAGCTCTTCTCTGTCGCTTTCAGCTGAGATTGCGTCAGCATTTCAAGATCTTAAAGCGGGATATTTAAGGATTCGACGGCTGTGTACATGCATTTCCAAGTTAATCGGCCCTCCAAGCAGGTAA 3714 41.46 MSSQPPIDNNNNSNTKSEQETTTLAFHKKRARRVSFAENTSVHIFNRDEDSGTPVNAKQPPSDENEYSDEPKFWNDNDNDNGNDEDVEEDEDEDVDMEDDMDESGGSRSPFLRLVGSSPSSGGSTFGSATSNDEDNFFGPVSTNFIRRDILDREASDGNHDQTMDSTAFSMHFRSIARSDSEVELKTSTGVHLSFEEKTPNQDSNPTHTGSLMLMTQAKKPNHQPSVSTSKLHTSSESNDMSIVGEYRYKYDYGELSPTLDALLAEGNKDLRVIAASKDTILKSPRMVATTEEYGANLMDFSCSEDNNNLEGIITHEMVNEDVAPKHNQLGVVNDGSNISSNKEMPLDVLSEAEKHLSSGSSILVTPNAKTTDLVKDAVQRKSSLDFMVTSQSNPNQHQPPFVGAVNSLTDKSSHMHFDGVSPSKLPSAVTPLHKSVFVRTDTPKHSRSVLSIQKSISKLKMLNASPFSADLTAKLEDSASRSVHSPSKMTPNTSLEKNHKVSLLNYTDDSGRLSSAIQKKRERASSTTMDDVRLQTPKNAVPVTHLQNVVKLASPLLIPPESALSGEKLQTELLSSADIRNGFEYDKDKSNLPQSFGYSPQKKLKIVNASEFRSSPLRDAKQFAKHNEPGENVTNASLSAIAANKTDALCIEMLEIDSSEMSTEEEMVDIGEVSLSEARGNLETKENATTILKDDQHVQIQPKFMESDIAGGESRRASPLLEEKTDKQSCQKNLHDEVCQSPSNKQPYDANVDFIPAENVPSPSPHRFSNGDIISEQGRKTISGVVERTARTQRSPNIPKSHVGTKVSSDNEISTIVHTFINPTEMTAMLCRETKELTPQSADKFNLHAIDCLTSIIDQLLKAKTYQLLSDEIKSQKSVDASKYIAHKRAAEMKLLVCKLVHEKAKLRLLNVKRERLLERVESVSSGILESEELRLIFPPQQSSLVHSKSLSVNMNNLHESQIDSDKVTSMEQTVDHIDRRIANLTKSFHKSCKMKGEPSAHDTIAFAKGFVKKRACCQIIRKDLQLWTVDNFEVGNGCRNVNLNYLDLITQRLTVKTGPVPSISVSHELHKANISKIFNDMDACAAFEFVFYAGMMQKHADATSLAQATQVTGSRLGSLLDVLEEMQHARIEPKNLISARFHTPKAEQLDIELCFFDSTHRRKATVTLDASCLARGIYPSEIVPYQVDIPIDEPQSSSLSLSAEIASAFQDLKAGYLRIRRLCTCISKLIGPPSR 1237
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g08385 1237 MobiDBLite consensus disorder prediction 111 138 - -
Chma7g08385 1237 MobiDBLite consensus disorder prediction 1 21 - -
Chma7g08385 1237 MobiDBLite consensus disorder prediction 1 138 - -
Chma7g08385 1237 MobiDBLite consensus disorder prediction 63 79 - -
Chma7g08385 1237 MobiDBLite consensus disorder prediction 709 730 - -
Chma7g08385 1237 MobiDBLite consensus disorder prediction 478 500 - -
Chma7g08385 1237 MobiDBLite consensus disorder prediction 80 101 - -
Chma7g08385 1237 PANTHER OS06G0608100 PROTEIN 1 1232 - -
Chma7g08385 1237 MobiDBLite consensus disorder prediction 22 36 - -
Chma7g08385 1237 Pfam Knl1 RWD C-terminal domain 972 1124 IPR040850 -
Chma7g08385 1237 MobiDBLite consensus disorder prediction 479 500 - -
Chma7g08385 1237 MobiDBLite consensus disorder prediction 217 237 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g08385 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
44005 Chma6g01831 Chma7g08385
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr6:41426022 Chma7g08385 Chma-Chr7:286294270 dispersed
Chma Chma-Chr6:41533456 Chma7g08385 Chma-Chr7:286294270 wgd