Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chma7g08398	ATGCCATCACTCTCCCAAACACCATCCTTCCATAAACCATCTTTCCAAACACTCTCTTTACGTAGAACTTCACCACCAATCATAAGGTGCACTATTTCATCCACTAGCACAAGTGGTGAAACTTCCAAGGCTGCTGTGGGCTCACAAGGGATACCGTGGGGTTGCGAGATTGATTCGGTCGAGAATGCTGCTGCCTTGGAGAAATGGTTGAGGGAATGTGGTTTGCCAGAGCAGAAAATGGATATAAAAAAAGTGGAAGTTGGTGAGAGAGGTTTGGTTGCGAATAATAATATTCGGAAGGGTGAGAAGTTGCTGTTTGTGCCTCCTTCGCTTGTTATTTCCGCGGATTCGGAGTGGAGTTTTCCAGAGGCTGGTGAAGTTTTGAAGAGATACGATGTACCCGATTGGCCATTAATTGCAACCTACCTAATTAGCGAGGCAAGTCTTATGAAGTCGTCTAGATGGAGCAACTATATTTCCGCGTTGCCAAGACAACCTTACTCACTTCTATACTGGACACGTGGAGAATTAGATAGGTACTTGGAAGCTTCTCAGATTAGAGAACGAGCAATTGAAAGGATCAATAATGTAACTGGAACGTACAATGACTTGAGGGCAAGGATTTTTTCCAAGCATCCTAATCTGTTTCCTGAAGAGATATACAATATGGAAACGTTTAGATGGTCCTTCGGCATTCTTTTTTCACGCTTGGTTCGATTACCTTCGTTAGATGGAAGGGTTGCGTTGGTGCCATGGGCAGATATGTTAAATCATAGTTGCGGTGTGGAAACCTTTTTGGATTACGATAAATCAACAAAGGGAGTCGTATTCACAACAGATCGCCCATACCAGCCAGGTGAGCAGGTTTTCATTTCATACGGAAGGAAATCTAATGGAGAACTACTGCTTTCTTACGGGTTTGTGCCAAGGCAAGGGACCAACCCACGTGACTCGGTTGAGTTGCCATTTTCACTTAAAAAATCAGATAAATGTTATGAACAAAAGGTGGAAGCTTTGAAGAAGCATGGATTGTCAGCATCACAATGTTTTCCGTTACAAGTCACGGGTTGGCCATTGGAGCTGATGGCATATGCATATTTAGCCGTGAGTCCACCGAGTATGAGTGGAAAGTTTGAGGAGATGGCTGCTGCAGCATCAAATAAAAACAACACTAATAAAGAGATCAGAATTCCTGAGCTAGAGGAACAAGCATTTCAATACATCTTGGATAGCTGTGAATCGAGTATATCAAAGTACACCAAGTTTCTACAGGCAAGTGGGTCAATGGATTTGGATATAACATCTCCAAAGCAGCTCAACCGTAAAGTGTTCCTTAAACAGCTAGCAGTCGACTTGTGCAATAGTGAACAAAGAATCCTATTTCGTACCCAATATATACTGAGGAGGAAATTGAGGGATATGAGAAGAGGTGAACTGAAGGCATTAAATTTGTTTGATAGTGTCTCAAAGTTCTTTAAATGA	1482	42.38	MPSLSQTPSFHKPSFQTLSLRRTSPPIIRCTISSTSTSGETSKAAVGSQGIPWGCEIDSVENAAALEKWLRECGLPEQKMDIKKVEVGERGLVANNNIRKGEKLLFVPPSLVISADSEWSFPEAGEVLKRYDVPDWPLIATYLISEASLMKSSRWSNYISALPRQPYSLLYWTRGELDRYLEASQIRERAIERINNVTGTYNDLRARIFSKHPNLFPEEIYNMETFRWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCGVETFLDYDKSTKGVVFTTDRPYQPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPFSLKKSDKCYEQKVEALKKHGLSASQCFPLQVTGWPLELMAYAYLAVSPPSMSGKFEEMAAAASNKNNTNKEIRIPELEEQAFQYILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKVFLKQLAVDLCNSEQRILFRTQYILRRKLRDMRRGELKALNLFDSVSKFFK	493

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chma7g08398	493	FunFam	Rubisco methyltransferase family protein	313	476	-	-
	Chma7g08398	493	ProSiteProfiles	SET domain profile.	78	294	IPR001214	GO:0005515(InterPro)
	Chma7g08398	493	Coils	Coil	187	207	-	-
	Chma7g08398	493	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	64	468	IPR050600	GO:0016279(PANTHER)\|GO:0018026(PANTHER)
	Chma7g08398	493	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	324	492	IPR036464	-
	Chma7g08398	493	CDD	SET-RBCMT	73	308	IPR044431	GO:0016279(InterPro)\|GO:0018022(InterPro)
	Chma7g08398	493	SUPERFAMILY	SET domain	63	310	IPR046341	-
	Chma7g08398	493	FunFam	Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic	47	307	-	-
	Chma7g08398	493	Gene3D	-	312	482	IPR036464	-
	Chma7g08398	493	Pfam	SET domain	90	294	IPR001214	GO:0005515(InterPro)
	Chma7g08398	493	SMART	set-7	78	300	IPR001214	GO:0005515(InterPro)
	Chma7g08398	493	Pfam	Rubisco LSMT substrate-binding	327	460	IPR015353	-
	Chma7g08398	493	PIRSF	RMT-SET	2	490	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)
	Chma7g08398	493	Gene3D	set domain protein methyltransferase, domain 1	60	308	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chma7g08398	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chma	Chma-Chr5:146271958	Chma7g08398	Chma-Chr7:286750652	dispersed
	Chma	Chma-Chr7:286750652	Chma7g08446	Chma-Chr7:288418495	dispersed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Chma	SET	9.8e-11	CL0489		TR	SET