Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chma7g08417 | ATGCAGCAGACGGAATCACCCATGAAATATGGCACCAACGGTCGACCTACAAATGGCCAACCTGTAAAATTGGGTGCTAATGGTAAACCAGTGAATTTGGGTGCTAATGGACAACCCGTGAAATTAGGTAGCAAAGGTCAACCGATCACAATGGTTTCCACCAGTGACGTGGTAAATAACAAACAAACAGCCGGAATAGTGAATGGGTCAACAAAAGTTGTTAATGGAACAAGTCTTGTTAGGAGAGCGACCACACCGCCGCTAGTTAAGTCTGTAAAAGTTATAGAATCCACAGGCTTTCCGCCTTCTGAGGAATTGAGGGTCTTGCCGTCTGATGAAAGTTTCAGTTGGGCGAATGAGAATTATAATTCGGTACAAAGATCAATAGATGTGTGGTCTTTTGTTCTTTCTTTACGTGTTCGTGTTTTATTAGACAATGCTAAGTGGGCGTATCCTGGAGGCTTCACAGAAGACAAACAGAAAGGCAGAAGAAGAAAAACGGCTGCATGGTTAAGAGAGCGCGTCCTTCAACTTGGTCCAACTTTTATTAAACTTGGGCAGTTATCTTCAACAAGATCAGATCTATTTCCACGTGAATTTGTCGACGAGCTCGCCAAATTACAGGATAGAGTACCGGCATTCTCACCAGAAAAAGCGAAGGGTTTCATTGAAAAAGAATTGGGTGCTCCGGTTAATATAATCTTTAAGGAGTTTGAAGAACGACCAATTGCAGCTGCTAGTCTTGGTCAGGTACATCGTGCAATCTTACATAATGGAGAGAAAGTAGTTGTTAAAGTTCAAAGACCTGGTCTGAAGAAACTTTTTGACATCGATTTACGGAATCTAAAGCTAGTCGCAGAGTATTTTCAAAGAAGTGAAACTCTTGGTGGCCCAACAAGGGACTGGATGGGAATCTATGATGAATGTGCAAAGATCTTGTACCAGGAGATTGATTATATAAATGAAGGGAAAAATGCTGATAGATTTCGTCGGGACTTCCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCAACGAAGGTGCTGACTTTGGAGTATGTTCCAGGCATTAAGATCAACAATATAGATGCTATAAAAGAGAGGAGTTACAGTCGATCCCGGATCTCTTCACGCGCCATTGAATCATACTTGATTCAGATCTTGAAAACAGGTTTCTTTCATGCTGATCCTCATCCCGGAAATCTTGCTATTGATGTGGACGAATCACTAATCTACTATGATTTTGGCATGATGGGGGAGATTAAGTCCTTCACCAGAGAAAGATTGATGGATCTTTTTTATGCGGTTTATGAAAAAGATGCAAAAAAGGTTATGAACAGTTTGGTAAGTCTTGAAGCCCTTCAACCTACAGGAGACATGTCACCGGTTAGGCGATCCATTCAGTTCTTTTTGGACAATTTGCTTAATCAATCACCAGATCAGCAGACAACTTTGGCTGCCATAGGCGAGGATTTATTTTCTATAGCAACGGATCAGCCTTTTCGGTTCCCATCCACCTTCACGTTTGTAATTAGGGCATTTTCCACTCTTGAAGGAATTGGCTACTCTCTTGACCCAGATTTTTCGTTTGTTAAGATTGCTGCGCCTTATGCACAGGAACTGTTAGATCTCAAAGAACAGCGGCCAAGTGGAACACAACTTGTTGCGGAAATGCGTAAACAAGCTGATGATGCAAGATCAAATACCATGTCGATGCCTTACAGAGTTCAGCGAATTGAAGAGTTTGTGAAACAACTAGAAATAGGAGACGTTAAACTTCGTGTCAGAGTTCTTGAGTCTGAACGAGCAGCTAAGAAGGCAACAATATTGCAAATGGCAACAATGTATACAATAATCGGGGGTACGCTTGTAAACATTGGTGTCACATTTAGCACACAAGGCAGCCAACTTATAGCAAACGGGTCCTTTGTTGCCGCAGGTGTTTTCATAGCTTTGCTTATTAGGTCCATGCAAAGGGTGAAGAAGCTTGATAAATTCGAGAAGATGATATAA | 2028 | 41.67 | MQQTESPMKYGTNGRPTNGQPVKLGANGKPVNLGANGQPVKLGSKGQPITMVSTSDVVNNKQTAGIVNGSTKVVNGTSLVRRATTPPLVKSVKVIESTGFPPSEELRVLPSDESFSWANENYNSVQRSIDVWSFVLSLRVRVLLDNAKWAYPGGFTEDKQKGRRRKTAAWLRERVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPEKAKGFIEKELGAPVNIIFKEFEERPIAAASLGQVHRAILHNGEKVVVKVQRPGLKKLFDIDLRNLKLVAEYFQRSETLGGPTRDWMGIYDECAKILYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNIDAIKERSYSRSRISSRAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSFTRERLMDLFYAVYEKDAKKVMNSLVSLEALQPTGDMSPVRRSIQFFLDNLLNQSPDQQTTLAAIGEDLFSIATDQPFRFPSTFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKEQRPSGTQLVAEMRKQADDARSNTMSMPYRVQRIEEFVKQLEIGDVKLRVRVLESERAAKKATILQMATMYTIIGGTLVNIGVTFSTQGSQLIANGSFVAAGVFIALLIRSMQRVKKLDKFEKMI | 675 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chma7g08417 | 675 | PANTHER | CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED | 109 | 607 | IPR050154 | GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER) | |
| Chma7g08417 | 675 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Chma7g08417 | 675 | Pfam | ABC1 atypical kinase-like domain | 206 | 452 | IPR004147 | - | |
| Chma7g08417 | 675 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Chma7g08417 | 675 | SUPERFAMILY | Protein kinase-like (PK-like) | 208 | 453 | IPR011009 | - | |
| Chma7g08417 | 675 | CDD | ABC1-ADCK3-like | 206 | 453 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chma7g08417 | K03688 | ubiquinone biosynthesis protein | ||||
| Chma7g08417 | K08869 | aarF domain-containing kinase |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chma | Chma-Chr2:94036082 | Chma7g08417 | Chma-Chr7:287541139 | dispersed | |
| Chma | Chma-Chr7:287541139 | Chma8g08113 | Chma-Chr8:302766730 | dispersed | |
| Chma | Chma-Chr7:287541139 | Chma7g08418 | Chma-Chr7:287605211 | tandem |