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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g08529 ATGGAGGAGGTGATGACGTTAGCAGATGCAACGTACCATGCTAACAAGGTGATCACAGCTGTGACACCATCATCGTCCTCAAGAGGTCCAGTGATGTTGTTGTATAGTGTTCCTTTGTTATCAGCGTTACTTGCCTTTGCTATTGCTCAGTTTCTTAAAGTCATTACTACTTGGTATAAGGAAAAGAGATGGGATCCTAAAAAGATTGTCGGCTCTGGTGGAATGCCATCATCTCATTCTTCAACTGTCGTGGCACTTGCAGTATCTATTGGTCTACACGAGGGAATTGATTCTTCATCGTTTGCAATTGCTGTTGTCATGGCTTTTATTGTTATGTATGATGCAACTGGAGTCAGACTCCATGCTGGTCGCCAAGCTGAAGTGTTGAACCAGATAGTGTGTGAATTTCCTCCGGAACACCCTTTATCCACATCCATACCTCTACGTGATTCGCTTGGGCATACTCCATTACAGGTGGTTGCAGGGGCCATACTAGGATGCATAGTGGCATTCGCGATGAAAGCAACTGACTAG 534 44.76 MEEVMTLADATYHANKVITAVTPSSSSRGPVMLLYSVPLLSALLAFAIAQFLKVITTWYKEKRWDPKKIVGSGGMPSSHSSTVVALAVSIGLHEGIDSSSFAIAVVMAFIVMYDATGVRLHAGRQAEVLNQIVCEFPPEHPLSTSIPLRDSLGHTPLQVVAGAILGCIVAFAMKATD 177
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g08529 177 CDD PAP2-like 39 172 - -
Chma7g08529 177 Pfam Divergent PAP2 family 38 169 IPR003832 -
Chma7g08529 177 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 11 175 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g08529 K09775 uncharacterized protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr7:291361104 Chma8g05389 Chma-Chr8:190521798 dispersed
Chma Chma-Chr7:291312584 Chma7g08529 Chma-Chr7:291361104 proximal