Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chma7g08534 | ATGACGGGAAAGAAGCGATTTGCTTCGAAATCAGTGATATTGTTATTGGTATTAATTTGTATCGTTGTATTAGTCGGGTTATTATCTCAGTTTAAGCTTCAGTCATCTACTGAATTCAGTTACAATCATGACTTAATCGAGTATCCGATAGTAAAGAAGAATAAGATTGCTTTTTTATTTCTTGTTAGAGATAACCTTCCTCTTGATTTCCTTTGGCATAATTTCTTCAAGAATGCAGATCCTGAGAATTTCACAATCTACATACACTCGAAGCCTGGCATTCTGTTTGACAAGTCAGTTACCAAATCAGCTTTCTTCTACAATCGGCAGTTGAGGAACAGCGTTGAGGTCGGTTGGGGTACACCAACTATGATTGAAGCAGAGAAGCTGTTGTTCAAGGCAGCCCTTGATGATCCAACAAATCAGATATTCATTCTCCTCTCTGACAGCTGTGTCCCTCTGTATAATTTCAGTTATATATACAAATATCTCATGTCATCTCTGAGAAGTTTTGTGGACAGCTTTATAGATGCGACGGATGATCCCAGGGAAAAACGCTATAACCCAGAGATGTCCCCTGACATACCCGAAGACAAATGGCGGAAAGGATCTCAGTGGATCACATTGGTCAGAAGGCATGCAGAGGTGGTTGCATATGATCACGCTGTTTTCCCAATCTTTGAAAAACACTGCAAGCGGCGACCTCTTCTAGACTTGAGCAAGGGAAACGAGTCTCTTATAGAACAACAGCAACACAATTGCATCCCAGATGAACATTATGTGTCAACCTTACTTGCAATGCGTGGATTTGAAGCTGAATTGGAGCGAAGAACATTAACTTATTCTTTATGGAACCAGTCTACTGAACCGATGAATACACAAGCCTGGCATCCTGTAACATTTGTTTTTTCAAGTGCGAGCCAGAAAAATATTCAAGATATTAAGGATATTGATCATGTTTATTTTAAGCCTGAAAACCGGACTGAATGGTGTGGTACTAAATCTGGTAGCGGTCATTGTTATTTATTTGCTAGGAAATTCTCGCGTGGTGCAGCCATGCGACTTTTGACCAATGGGGTAGTTGGTCCCTATGATCCCAGCACATTGTTCTTAGACCCAACATAG | 1125 | 40.44 | MTGKKRFASKSVILLLVLICIVVLVGLLSQFKLQSSTEFSYNHDLIEYPIVKKNKIAFLFLVRDNLPLDFLWHNFFKNADPENFTIYIHSKPGILFDKSVTKSAFFYNRQLRNSVEVGWGTPTMIEAEKLLFKAALDDPTNQIFILLSDSCVPLYNFSYIYKYLMSSLRSFVDSFIDATDDPREKRYNPEMSPDIPEDKWRKGSQWITLVRRHAEVVAYDHAVFPIFEKHCKRRPLLDLSKGNESLIEQQQHNCIPDEHYVSTLLAMRGFEAELERRTLTYSLWNQSTEPMNTQAWHPVTFVFSSASQKNIQDIKDIDHVYFKPENRTEWCGTKSGSGHCYLFARKFSRGAAMRLLTNGVVGPYDPSTLFLDPT | 374 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chma7g08534 | 374 | PANTHER | CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED | 16 | 356 | IPR044174 | GO:0016757(InterPro) | |
| Chma7g08534 | 374 | Pfam | Core-2-I-Branching enzyme | 56 | 314 | IPR003406 | GO:0016020(InterPro)|GO:0016757(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chma7g08534 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chma | Chma-Chr7:3373025 | Chma7g08534 | Chma-Chr7:291692449 | dispersed | |
| Chma | Chma-Chr7:3390300 | Chma7g08534 | Chma-Chr7:291692449 | dispersed | |
| Chma | Chma-Chr7:291692449 | Chma8g04752 | Chma-Chr8:171448397 | dispersed | |
| Chma | Chma-Chr7:291692449 | Chma7g08540 | Chma-Chr7:291851875 | proximal |