Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chma7g08749 | ATGGCAGTCCATTGGAGAGTTCATGGTCTCACCTGGCAAAATGCTTTTTCTGAAGAAATTGCTGTTCCTCAGCCAGATCCATTAAATTCCAAGAATCTTCATGAGGGAAAGGAGCTGAGGGGAGCTCCAGTACCTTTGGAACTATCTCCAACCAAAATGTCAACACCAAGTCAGTCAGTTTCATCCTTTTCGGCATCTCCTTTATCTTCTTCCCAAGGCATAATGTCCCCTAACTTTTCAATATCTGAGGAGGGTTCTCCTTTTATGCATCCTGGGTGGAGCAATAAATCGAACAGGGGGTCGCATGGTGGATCTTCTGATAGCTGGTCTATTCCGGCCTTTTCTGAGCTGGTGGCAACTTCTAATAGAGATAGATGGTCTTTTGATAGTGAGTCTTTAAGCTTTAGTCGTGATAGGATTAGCAGATCTAGTGGCAGGGTTTCATCTTCTCCTTCTGTAGACATGCAGACGTGTGGTTTCTGCTCCAGACTTCTAACTGAAAGATCATCTTTTAGCAGCCAGAAAATCGTTGCCACCAATGGGCTTCCTGTTGTTTCTGTTCTGATTTGTGGGCATATTTACCATGCGGAATGTTTAGAGAATATGACACCTGAGGTGAATAAGTATGATCCAGCATGCCCCATTTGTACTTTAGGAGAAAAAAAGGTTCTCAAGTTATCAGAAAAAGCACTAGGAGCTCAAATGGATTTAAAGGGTAAACTCTGCAAAAAATTAAGGAATCGGGTGATGGATGGCGATTCTGTTTTGTTTGACCGCCTTACGAGTGGCAAAGGTCCCAGGATGGGCTCAAGTTCCAGCATGAAGACCTCTACTAGTACAACAAAGCCATTTTTAAGGAGACACTTCTCTTTTGGCTACAAACCAAACCGATCCATGGCAGACAACAGTTCAAGGAAAAAGAGATTTTTCTGGACAAAATCAAGCAAGGAGTGA | 954 | 43.08 | MAVHWRVHGLTWQNAFSEEIAVPQPDPLNSKNLHEGKELRGAPVPLELSPTKMSTPSQSVSSFSASPLSSSQGIMSPNFSISEEGSPFMHPGWSNKSNRGSHGGSSDSWSIPAFSELVATSNRDRWSFDSESLSFSRDRISRSSGRVSSSPSVDMQTCGFCSRLLTERSSFSSQKIVATNGLPVVSVLICGHIYHAECLENMTPEVNKYDPACPICTLGEKKVLKLSEKALGAQMDLKGKLCKKLRNRVMDGDSVLFDRLTSGKGPRMGSSSSMKTSTSTTKPFLRRHFSFGYKPNRSMADNSSRKKRFFWTKSSKE | 317 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chma7g08749 | 317 | ProSiteProfiles | Zinc finger RING-type profile. | 158 | 217 | IPR001841 | - | |
| Chma7g08749 | 317 | MobiDBLite | consensus disorder prediction | 41 | 105 | - | - | |
| Chma7g08749 | 317 | MobiDBLite | consensus disorder prediction | 300 | 317 | - | - | |
| Chma7g08749 | 317 | MobiDBLite | consensus disorder prediction | 91 | 105 | - | - | |
| Chma7g08749 | 317 | MobiDBLite | consensus disorder prediction | 50 | 83 | - | - | |
| Chma7g08749 | 317 | PANTHER | EXPRESSED PROTEIN | 54 | 222 | - | - | |
| Chma7g08749 | 317 | MobiDBLite | consensus disorder prediction | 265 | 280 | - | - | |
| Chma7g08749 | 317 | SUPERFAMILY | RING-U-box | 151 | 217 | - | - | |
| Chma7g08749 | 317 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 138 | 218 | IPR013083 | - | |
| Chma7g08749 | 317 | MobiDBLite | consensus disorder prediction | 296 | 317 | - | - | |
| Chma7g08749 | 317 | MobiDBLite | consensus disorder prediction | 261 | 280 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chma7g08749 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chma | Chma-Chr7:296373522 | Chma7g08749 | Chma-Chr7:296423720 | proximal |