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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g08765 ATGGCTTCATCAAGTGGCACAATGACATCTTCTGGTGGATCAGAACTTCAAGAAGAAATGGATCAAAGGAAAAAAAGACGAATGATTTCGAACCGAGAATCAGCAAGAAGATCAAGAATGAGAAAACAAAAGCATTTGAACGATTTAATGACTCAACTGAGTCAACTCAGATCGGAGATCAACTCGGTCATGTCTAATATTAGCATGACCACTCAGCATTACATGAGTGTTGAGGCTGAGAACTCGGTTTTAAGAGCTCAAGTGGCTGAGCTCGGTCATAGGCTTGAGTCGCTTAATGAGATAATCGCGGTTATGGAACGACCCGTTGAGATTGGAAGCGCGTTTGGAGATGAACTCACTGAGTTCGGGGGCGAGTTTGTGAATGACTCACTGAGTTATCTTTACTCTTGTCAACCTATTTTGGCTTCTGCTGACATGAACATGTACTAA 450 42.44 MASSSGTMTSSGGSELQEEMDQRKKRRMISNRESARRSRMRKQKHLNDLMTQLSQLRSEINSVMSNISMTTQHYMSVEAENSVLRAQVAELGHRLESLNEIIAVMERPVEIGSAFGDELTEFGGEFVNDSLSYLYSCQPILASADMNMY 149
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g08765 149 Pfam bZIP transcription factor 22 79 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Chma7g08765 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Chma7g08765 149 MobiDBLite consensus disorder prediction 1 43 - -
Chma7g08765 149 MobiDBLite consensus disorder prediction 1 16 - -
Chma7g08765 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Chma7g08765 149 CDD bZIP-plant-GBF1 24 75 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Chma7g08765 149 SMART brlzneu 19 83 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Chma7g08765 149 MobiDBLite consensus disorder prediction 17 36 - -
Chma7g08765 149 Gene3D - 21 104 - -
Chma7g08765 149 FunFam BZIP transcription factor 21 72 - -
Chma7g08765 149 SUPERFAMILY Leucine zipper domain 23 75 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Chma7g08765 149 Coils Coil 39 66 - -
Chma7g08765 149 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 107 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g08765 K25786 bZIP transcription factor 1/2/11/44/53
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr7:296981912 Chma8g00419 Chma-Chr8:20539800 dispersed
Chma Chma-Chr7:296869713 Chma7g08765 Chma-Chr7:296981912 proximal
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chma2g03592 . 213 293 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 49.383 6.75e-18 80.5
Chma2g08395 . 41 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 56.325 2.47e-99 294.0
Chma2g00336 . 185 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G31370 67.327 7.12e-36 126.0
Chma5g06472 ACH 5 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.898 1.24e-49 156.0
Chma8g04594 . 16 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 48.817 9.48e-83 252.0
Chma6g02456 . 19 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 45.695 3.86e-37 123.0
Chma3g04890 ACH 54 493 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 52.838 1.22e-121 365.0
Chma4g08848 . 217 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 52.174 7.97e-15 66.2
Chma7g07095 . 106 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 39.81 7.71e-32 115.0
Chma7g04049 . 12 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.941 2.63e-93 277.0
Chma4g02722 . 26 229 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 66.019 4.36e-84 252.0
Chma4g04215 . 63 262 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 39.72 2.84e-26 99.4
Chma6g08495 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 55.107 7.92e-118 348.0
Chma1g10214 . 63 260 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 51.256 9.31e-51 166.0
Chma2g01337 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 75.152 1.74e-178 495.0
Chma6g02449 . 37 126 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 62.222 4.45e-32 118.0
Chma5g05629 . 202 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 47.475 3.27e-20 85.9
Chma4g02726 . 26 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 53.295 5.72e-102 301.0
Chma7g02158 . 39 69 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G01120 67.742 6.14e-10 52.0
Chma2g05665 . 155 197 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06850 86.047 9.59e-17 75.9
Chma7g03307 . 8 142 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 57.037 7.77e-52 159.0
Chma8g06922 . 349 424 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 69.737 5.22e-27 105.0
Chma8g04766 . 1 271 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 47.078 3.04e-69 217.0
Chma3g00256 . 104 317 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 26.506 1.55e-17 79.7
Chma5g03344 . 34 105 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 65.753 7.65e-25 99.4
Chma8g02886 ACH 1 522 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 56.206 5.54e-172 496.0
Chma8g03507 . 109 320 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 27.778 2.13e-17 77.8
Chma8g02239 . 1 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 51.672 3.06e-94 280.0
Chma5g05428 . 155 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 60.0 9.37e-18 80.1
Chma4g05448 . 35 78 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 66.667 1.84e-11 58.9
Chma6g01653 . 114 239 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 25.85 7.20e-08 48.9
Chma7g04471 . 46 95 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 60.784 2.37e-11 60.5
Chma3g04768 . 1 246 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 53.358 4.74e-88 259.0
Chma7g07094 . 106 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 41.232 4.62e-37 129.0
Chma2g06762 . 22 214 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 35.567 3.79e-26 98.6
Chma3g03773 . 56 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 57.143 1.36e-37 123.0
Chma4g06118 ACH 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.325 9.12e-109 318.0
Chma6g01649 . 114 204 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 28.261 7.37e-07 45.8
Chma8g10883 . 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 64.831 1.34e-104 303.0
Chma1g04961 . 6 323 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 34.973 1.22e-44 155.0
Chma6g08500 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 54.869 9.28e-119 350.0
Chma8g06639 . 32 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 46.923 1.17e-31 108.0
Chma1g01966 . 5 388 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 58.718 9.71e-142 407.0
Chma9g08200 . 1 413 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 46.667 5.20e-94 287.0
Chma1g06950 . 37 124 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 39.773 2.69e-18 76.3
Chma2g06299 . 114 210 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 38.144 1.48e-10 59.7
Chma7g01236 . 109 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 26.54 5.10e-17 76.3
Chma4g09212 . 217 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 61.957 3.25e-25 100.0
Chma9g08604 . 202 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 28.283 1.53e-08 50.8
Chma9g07495 . 23 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 57.848 2.82e-175 495.0
Chma8g00419 . 66 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 46.226 5.93e-22 87.0
Chma5g04893 . 1 200 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 61.692 6.36e-84 255.0
Chma8g06281 ACH 207 275 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 76.812 1.76e-27 99.4
Chma0g01188 . 115 210 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 41.905 9.99e-10 54.3
Chma4g05752 . 49 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 50.0 1.27e-20 81.6
Chma3g02544 ACH 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 54.286 2.74e-108 318.0
Chma7g09289 . 1 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 41.702 5.37e-89 275.0
Chma9g08157 . 25 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 75.0 1.22e-59 181.0
Chma2g01151 . 147 469 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 35.833 1.20e-35 135.0
Chma2g01560 . 27 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 69.301 4.26e-151 433.0
Chma2g06293 . 112 208 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 38.144 4.20e-11 56.6
Chma4g05218 . 29 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 60.432 1.11e-49 157.0
Chma7g03309 . 8 142 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 57.037 7.77e-52 159.0
Chma6g03539 . 1 176 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 61.667 2.44e-73 220.0
Chma4g01505 . 217 262 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 63.043 3.78e-12 60.1
Chma6g04350 . 24 365 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.046 6.47e-99 294.0
Chma9g08201 . 67 395 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 40.922 1.52e-49 169.0
Chma8g03371 . 63 100 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 60.526 2.08e-09 53.9
Chma5g04894 . 198 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 68.657 7.50e-53 167.0
Chma7g04579 . 92 375 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 44.099 2.87e-74 233.0
Chma5g05603 . 24 78 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G32150 54.545 1.81e-14 67.0
Chma1g05084 . 1 326 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 26.178 7.06e-14 70.5
Chma7g01238 . 109 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 27.358 6.34e-17 75.9
Chma9g04760 . 53 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 65.517 5.55e-43 140.0
Chma3g00397 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 74.242 6.29e-176 488.0
Chma8g04769 . 1 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 49.401 6.79e-87 260.0
Chma2g03670 . 120 192 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 68.0 1.73e-21 85.5
Chma3g03772 . 19 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 50.0 1.31e-38 127.0
Chma6g01650 . 114 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 23.377 2.41e-08 52.0
Chma8g08860 . 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 61.111 0.0 592.0
Chma2g06300 . 34 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 50.951 1.60e-71 219.0
Chma2g01866 . 250 281 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 78.125 1.09e-10 53.5
Chma4g06822 ACH 11 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 51.765 9.10e-114 337.0
Chma6g03549 . 34 124 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 58.242 6.25e-28 104.0
Chma9g06676 . 29 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 40.752 8.20e-62 196.0
Chma3g02719 . 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 68.103 5.49e-48 152.0
Chma3g07048 . 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 26.728 5.96e-12 62.8
Chma3g06402 . 218 282 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 56.923 3.15e-18 75.9
Chma9g05175 . 4 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 48.276 3.93e-95 288.0
Chma6g02936 . 22 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 44.169 8.47e-80 248.0
Chma1g05086 . 1 323 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 33.425 3.49e-37 136.0
Chma6g08181 . 11 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.214 7.68e-40 130.0
Chma3g02856 . 5 140 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 40.0 8.99e-20 78.2
Chma7g07587 . 1 240 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 45.669 6.04e-59 184.0
Chma2g06292 . 114 215 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 40.196 1.10e-11 60.5
Chma2g01149 . 147 459 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 34.857 1.38e-29 120.0
Chma8g02888 ACH 1 478 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 37.698 1.48e-61 205.0
Chma7g08762 ACH 19 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.322 2.92e-38 126.0
Chma3g04767 . 1 246 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 53.358 4.74e-88 259.0
Chma8g10864 . 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 63.983 2.27e-101 295.0
Chma3g04022 . 88 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 67.639 2.26e-159 457.0
Chma2g06297 . 74 162 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G15830 38.202 1.10e-06 44.7
Chma5g04796 . 146 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 49.327 4.47e-146 438.0
Chma3g00255 . 104 317 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 27.016 3.70e-18 81.3
Chma7g09294 . 21 384 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 47.059 1.61e-80 251.0
Chma9g08154 . 25 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 75.0 1.22e-59 181.0
Chma9g05886 . 223 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 65.116 1.78e-32 124.0
Chma4g04019 . 24 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 43.367 2.36e-72 228.0
Chma7g08765 . 19 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.322 2.92e-38 126.0
Chma4g00346 . 132 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 46.193 3.34e-39 135.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Chma bZIP_1 2e-08 CL0018 TF bZIP