AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g08966 ATGCTTGTAGAAGGAGATGGAAGTAATGTCATAAGGCTAAACACCATGGATGATCACGGTCATGAAGTCCGTCATAATGTTCACATGACACAAACTGGCCATGTACATGGTCATGGCCATCATTCGTCGTCGTCTACGAATCCAAAAGATCCTCAACTCATGGTATTCTACATGCTAAAAGATCTAGAAGTAGGCAAAGTCATGCCAATTCACTTTCCAAACAGACACCTTTCCCCGTCTCAACTCTTGTCCAAACAAGAAGCTGACAACATCCCCTTTTCGCTCACGGAATTACCAAACCTTCTTCGTATGTTCTCGTTCCGACAAGGCTCTCCACAAGCCATAGCTATGGAAAGCACACTTCAAGAATGTGAAGTCAAGCCAATCACGGGTGAAACCAAATTTTGTGCAACTTCTATGGAGTCTGTTCACGAATTTGCACGTGATATCTTTGGATTCGACACTCAGTTCAAAACTATGACCACAACTCACCTTAAAAATCCACCGAGTGGACTTTTACAAAACTATAAAGTTATTGAGATCTCACAAAACATACCATCTCCAAAGTTAGTGGCTTGTCACACCATGCCATACCCATATGCAGTGTTCTATTGTCATAGCCAAGAAAGCGAGAACAAAGTGCTTATGGTTACATTAGAAGGCGAAGATGGTGACATGGTCGAGGCCTTAAGTGTTTGTCACATGGACACGTCTCATTGGAGCCGTAATCATGTCTCGTTCGGCGTGCTTGGAGTCGAGCCAGGAATGACATCGGTTTGCCACTTCTTTCCTAGTGATCATTTTGTGTTTATACCTTTTTCGGCAACGATGTAA 834 43.05 MLVEGDGSNVIRLNTMDDHGHEVRHNVHMTQTGHVHGHGHHSSSSTNPKDPQLMVFYMLKDLEVGKVMPIHFPNRHLSPSQLLSKQEADNIPFSLTELPNLLRMFSFRQGSPQAIAMESTLQECEVKPITGETKFCATSMESVHEFARDIFGFDTQFKTMTTTHLKNPPSGLLQNYKVIEISQNIPSPKLVACHTMPYPYAVFYCHSQESENKVLMVTLEGEDGDMVEALSVCHMDTSHWSRNHVSFGVLGVEPGMTSVCHFFPSDHFVFIPFSATM 277
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g08966 277 Pfam BURP domain 55 271 IPR004873 -
Chma7g08966 277 ProSiteProfiles BURP domain profile. 56 273 IPR004873 -
Chma7g08966 277 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 42 272 IPR044816 -
Chma7g08966 277 SMART BURP-2 54 273 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g08966 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr7:301934933 Chma7g08966 Chma-Chr7:302194562 proximal