AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g09012 ATGAAAAAAGAGCCTCTTGAATCATTGGTAATAAATAAAAAAGAAAATGAAGAAGCAGTGATAATTGGTGGTATGGTGTTGGATATACATGCTACTCCTTCTATTAATCCTGCCCCTAGAACTACTACTCCTGGCAAGGTGCACTATGCAGCAGGAGGTGTAGCGAGGAACATAGCTGAGTGTGTATCAAAGTTTGGAACAAAGCCTTTCATGATAAGTGCATTAGGATTGGACATGTCAGGGAATTTGCTATTGGAGTACTGGAAGTCTGCAGGATTATCAACGCAAGGCATTAGAATGGGCCACGAGATAGAGACTCCGGTTGTATGCATTGTTTTTGATACTGAAGGAGAACCAGCTGCTGGTGTTGCAAGCGTTGAATCACTAGAACGATATCTCACGCCACAGTGGATTCAACAATTTAAATCTAATATATCATCTGCTCCTATCGTGATGGTTGATGCAAATTTAAGCCAACCAGCTCTAGAAGCATCTTGTCAATTGGCGGCAGAGGTTGGTACCCCGGTGTGGTTTGAGCCTGTATCAGTAGCAAAGTCGAGAAGAATTGTTTCAGTTGCGAAGTATGTAACCTTTGCTTCGCCTAACGAAGACGAGCTTATTGCAATGGCAAATGCTCTATCTGATAAAGACATTTTTTTTCCAGTACAAAAAGATGGAATCCCAGTAACATCTTTATTTCAACAACTAAAACCCGCAATCTGGGTTTTGCTTGAAAAAGGCATTAAAGTAGTTATTCTAACCCTCGGGTCAAAAGGGGTATTGTTATGTTCCAAACACCACCTCAACTTTCAAAATATTTGCCCTAACAGAACCATTAAGTCGCATAATATTGGCCAAAAGTTACACGAAATAATAAATCAAGTCTGCCCATCGGACCGGTTTTTTAGTGGGCTTAAAGAAAGTTCTAGAAGCAGCCCGTTTGTTGTGCATTTTCCAGCTGTATTGTCTTCATCGGTTGTGAGGCTAACAGGAGCGGGTGATTGCTTGGTTGGTGGCTCGATTGCTTCTTTTTGTGTAGGGTTAGATCTAATGCAAAGTATTGCGGTTGGTATAGCAGCTGCTAAGGCTACTGTTGAGGTTGAGGCAAACGTGCCCACTGAATATAGCTTGGAGCAAATTACGGCCGATGCAAGAACGGTGTACTTGGGTGCCACGGTTGTTTTTAGTCAGTCGATGTTATAA 1203 41.9 MKKEPLESLVINKKENEEAVIIGGMVLDIHATPSINPAPRTTTPGKVHYAAGGVARNIAECVSKFGTKPFMISALGLDMSGNLLLEYWKSAGLSTQGIRMGHEIETPVVCIVFDTEGEPAAGVASVESLERYLTPQWIQQFKSNISSAPIVMVDANLSQPALEASCQLAAEVGTPVWFEPVSVAKSRRIVSVAKYVTFASPNEDELIAMANALSDKDIFFPVQKDGIPVTSLFQQLKPAIWVLLEKGIKVVILTLGSKGVLLCSKHHLNFQNICPNRTIKSHNIGQKLHEIINQVCPSDRFFSGLKESSRSSPFVVHFPAVLSSSVVRLTGAGDCLVGGSIASFCVGLDLMQSIAVGIAAAKATVEVEANVPTEYSLEQITADARTVYLGATVVFSQSML 400
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g09012 400 CDD YeiC-kinase-like 20 366 - -
Chma7g09012 400 Gene3D - 12 389 IPR029056 -
Chma7g09012 400 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 52 76 IPR002173 GO:0016301(InterPro)
Chma7g09012 400 SUPERFAMILY Ribokinase-like 20 371 IPR029056 -
Chma7g09012 400 PRINTS Ribokinase signature 21 42 IPR002139 GO:0016301(InterPro)
Chma7g09012 400 PRINTS Ribokinase signature 191 206 IPR002139 GO:0016301(InterPro)
Chma7g09012 400 PRINTS Ribokinase signature 251 262 IPR002139 GO:0016301(InterPro)
Chma7g09012 400 Pfam pfkB family carbohydrate kinase 18 277 IPR011611 -
Chma7g09012 400 PANTHER ZGC:136858 22 383 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g09012 - -