AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g09031 ATGGATGATGAATCAGAAGTAGCCAAGCGTATCACAGTTGGTGTGGGTCCCACCTCTGTTTTGGAATACCTTGATCCTAACTACTGGAATGATAGGTTTACCTCTGAGGATCATTATGAGTGGCTTAAAGATTACTCCCATTTTCGTCATCTTATTCAGCAACATATCAAACCTGCATCTTCTGTATTGGAGCTCGGATGTGGGAACTCACAACTGTGTGACGAGCTATATAAAGAAGGAATTACTAATCTAACCTCCATTGATTTATCTTCAGTTGCAGAAGCTGCCAAAATGCAGAAACGACTGTTATCAAAGGGCCTTAAAGCTAATTGTGTATTGTCATATTATAAGTTGGGTCAAGTGCCATCGTCGAATCATGTAACCGTTAACCATATTAAAGTTATGGAAGGCGACATGCTGAATCTTTCCTTTAGTGATGAGTCGTTTGATGTTGTTATAGAGAAAGGAACTATGGATGTTTTGTTCGTGGACAGTGGTGACCCTTGGAACCCGCGGCCAGAGGCTGTTAACAAGGCAATGGCAATGCTTCAAGGTGTTCATAGGGTTTTAAAACCTAACGGGATCTTCATCTCAATCGCTTTTGGTCAGCCACACTTTAGGCGTCCGTTATTTAATGCTCCTGAGTTCACGTGGTCAATCGAGTATTCTACATTTGGTGATGGATTCCACTACTTCTTTTATATTTTGAGGAAGGGATGCAGATCTCTAGACTCCGATGCAGATATGAATAAGGTTGAGACACCATCTATATGCCTTTATCAAGATGAATTAGATAATGAAGATTACTTATTTCGCACCAATATTGATGAAATGGACGATGAAAGATAG 849 40.28 MDDESEVAKRITVGVGPTSVLEYLDPNYWNDRFTSEDHYEWLKDYSHFRHLIQQHIKPASSVLELGCGNSQLCDELYKEGITNLTSIDLSSVAEAAKMQKRLLSKGLKANCVLSYYKLGQVPSSNHVTVNHIKVMEGDMLNLSFSDESFDVVIEKGTMDVLFVDSGDPWNPRPEAVNKAMAMLQGVHRVLKPNGIFISIAFGQPHFRRPLFNAPEFTWSIEYSTFGDGFHYFFYILRKGCRSLDSDADMNKVETPSICLYQDELDNEDYLFRTNIDEMDDER 282
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g09031 282 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 16 239 IPR051419 -
Chma7g09031 282 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 234 IPR029063 -
Chma7g09031 282 CDD AdoMet-MTases 62 201 - -
Chma7g09031 282 Gene3D Vaccinia Virus protein VP39 21 253 IPR029063 -
Chma7g09031 282 Pfam Methyltransferase domain 57 199 IPR025714 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g09031 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr7:304240392 Chma9g03626 Chma-Chr9:90638764 dispersed
Chma Chma-Chr7:304054381 Chma7g09031 Chma-Chr7:304240392 tandem