Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chma7g09091 | ATGTGGTTGAATGTTCCTATAGCAATACTACTAGTATCAGGTGTTCATTTTTTGTTAAGCGAAGTTGAATTCCGTTGGAAGACAAGAAAGCCTATTGGGCAATCGTATTTAGCGCATTTAGAGAAGAAACAATTGTCTGTAAATGATTCTCGTCTTACCACATTACCTCCTCCACCTAAATGGAAGAGGAAGATTGATTCTCCGGTAGTCGAGGCTGCTATGGATGATTTTGTTAATAAGATTTTGCAAGAATTTGTTCTTGATATGTGGTATTCGGATATAACGCCTGATAAGGAAGCACCACAGCTTATACATGGGATTATTATGGATATTCTTGCCGAGATTTCCACGAGAGCGAAAGACATAAACCTCGTTGACTTGCTAACAAGAGATGTAGTTGATCTAGTAGGTGATCACTTAGAGCTTTTCCGGAAAAATCAGGCTGCTATTGGCAGGGACGTTATGGTGACACTTTCTTCCGAAGAAAGAGATGAAAGGTTGAAACGTCATCTTATGGCTTCTAAGGAGCTTCATCCGGCTTGTATATCTTCTGAGAGCGAGTACAAGTTTCTTAAGCGAGTGATGGGGGCAGTTTTGGCTGCTGTCCTAAGACCACGAGAAAAGCAATGCCCTATAGTTCGATGCATTACACGAGAGCTTTTAACATGCTTGGTAATGGAACCTGTAATGAAATTTGCAAGTCCCGGGCAAATCAATGAGTTAATCGAGGGTATTTTCCTCGCCAACAATAACAAGGGAGACAACGAAGCAGGAGATGATCAGTCAACTAATGTCACTGATCAACCTCAGAATCAACCCGTTGCTATAAACCATGAAAAGTCTCAAGAGTCTACTTCCTTGAGAAGCGGCTCTTTTCATAATCCAAAGAATGATACACCTAATGACCAAAAGGAACCGATCTTAAACCCACCTGGCACTATTGCTAGTGATCCGGTTCAAGATAAATCAGTGCAGCCACGGTCCTCGAAATGGGCCCGGGTTCTTGAGGCAGCAACCCAAAGAAGGACCGAAGTTCTTCAGCCAGAAAACCTTGAAGATATGTGGACCAAAGGAAGAAACTATAAGAAAAAAGCTCAGAAGAAAGCTGCTCAAGGACTTCAACCTTCTATGGTAGATGGTTCTGCATTACCTGGTTTAAATGAAAATTCTAATGACCAACCACAAGAGCAAAATCTTGACGCTGATCAAAGCAAGACGTCCGATCTTTCTGAGTTAGCTGATGAAAGTTCTAATTTTGTTAGTGAAAGTAAAGCTACGTCGGAAAAATCAAATAGTTCATCTGATTTGAACATTCAAAACCAAAGTGAAACTGCACGTCCAACCCAAGCTGGTGGTTCCGTCATCTCAGAGTTTTACAGTGCGAATGTCAGTGGAGACAATGATTTACATAATTTTAATGTTACTTCTGATAAAGCCACTCATACAGAAGGGCCTGTCCCCAAGCTTAGGTGTCGGGTTCTAGGAGCATACTTTGAGACTCTTGACTCAAAATCATTTGCAGTCTATTCGATTGGTGTGACAGATGTTGATAACAACACTTGGTTTGTGAAAAGAAGATATAGGAATTTTGAGAGATTGCACCGCCATCTTAAGGACATTCCCAATTATACTTCACAGTTACCTCCTAAAAGGATATTTTCGTCTAGTACAGAGGATGCGTTTGTTCGTCAACGCTGTATACAGCTTGATAGATATCTGCAAGACCTATTGTCTATACCTAATATCGCTGAGCAACATGAAGTATGGGACTTTTTGAGCTTGTCTTCGAAGAGTTACTCTTTTGGAAGGTCATCGTCGGTAGTAAGAACCTTAGCAGTCAATGTGGATGATGCTATGGATGATATTGTACGTCAATTCAAAGGAGTTTCAGATGGGCTAATGCGAAAAGTTGCTGGCCCGGTTTCCCCTACTGACTCATCTGCTTCAGTATCTAACAGAAAAATGTCATTTAAGGGTGATGAAGCAATTGACTCCGTCACAAAGCGAACTACCTCGGATGTTGGTAACAGTTTTTCTAACAATGAGGATGGTGAAATAGATGCAACACTTCACTATGAGGAAGTGGGGTTCGTTGCACAAGCTAATGAGCGAAATTTGGACAAGTTGAACTCAAAAGGATTTGCTAAAAGTGATGAACAGAATAAGAATATTGCAGAGGCGCGATCTGAAATACTCGGTATGGGAGCTAATCTTGCTTCAGCGCCTGGTCTCAAGGAAGATCCACTTGGTGTCCCAGCAGAGTGGACACCGCCTAATGTAAGTGTTCCATTGCTAAATTTAGTGGACACGATATTTCAACTTAACAGAAGAGGCTGGCTAAGACGACAGGTGTTTTGGATGTCGAAGCAGATCTTACAGCTAATGATGGAAGATGCTATTGATGATTGGCTTGTAAGGCAAATCCATTGGCTCAGGAGAGAGAATGTTGTTGCTCAAGGGGTTCGTTATCTCCAAGATGTTCTTTGGCCTGAAGGCACATTTTTTCTGAAGTTGAGAGCAAATCAAGCAGATTCTTCTCAATCAAATGAAGGTTCCGGCAAGACCTCATCTGGCAATAAAAATACTAAACAAGGGTCATTTGAAGAGCAGCTTCAGGCTGTCCGTAGAGCCAGTGAGATCAAGAAGATGATATTCAAGGGAGCACCAACTACTTTAGTCAGCTTAATTGGAAATAAGCAATACAAGCGATCTGCTAAAGATATATATTATTTTCTCCAGTCTGCAGTGTGTTTAAAGCAACTTGGGTATGGTTTACTTGAACTTATACTCATAACGGTTTTCCCAGAGCTTCAAGAAGTCATAATCAATATTCATGAGAAGAAGAAGAAAGACCCGAAGGTGTAG | 2865 | 41.19 | MWLNVPIAILLVSGVHFLLSEVEFRWKTRKPIGQSYLAHLEKKQLSVNDSRLTTLPPPPKWKRKIDSPVVEAAMDDFVNKILQEFVLDMWYSDITPDKEAPQLIHGIIMDILAEISTRAKDINLVDLLTRDVVDLVGDHLELFRKNQAAIGRDVMVTLSSEERDERLKRHLMASKELHPACISSESEYKFLKRVMGAVLAAVLRPREKQCPIVRCITRELLTCLVMEPVMKFASPGQINELIEGIFLANNNKGDNEAGDDQSTNVTDQPQNQPVAINHEKSQESTSLRSGSFHNPKNDTPNDQKEPILNPPGTIASDPVQDKSVQPRSSKWARVLEAATQRRTEVLQPENLEDMWTKGRNYKKKAQKKAAQGLQPSMVDGSALPGLNENSNDQPQEQNLDADQSKTSDLSELADESSNFVSESKATSEKSNSSSDLNIQNQSETARPTQAGGSVISEFYSANVSGDNDLHNFNVTSDKATHTEGPVPKLRCRVLGAYFETLDSKSFAVYSIGVTDVDNNTWFVKRRYRNFERLHRHLKDIPNYTSQLPPKRIFSSSTEDAFVRQRCIQLDRYLQDLLSIPNIAEQHEVWDFLSLSSKSYSFGRSSSVVRTLAVNVDDAMDDIVRQFKGVSDGLMRKVAGPVSPTDSSASVSNRKMSFKGDEAIDSVTKRTTSDVGNSFSNNEDGEIDATLHYEEVGFVAQANERNLDKLNSKGFAKSDEQNKNIAEARSEILGMGANLASAPGLKEDPLGVPAEWTPPNVSVPLLNLVDTIFQLNRRGWLRRQVFWMSKQILQLMMEDAIDDWLVRQIHWLRRENVVAQGVRYLQDVLWPEGTFFLKLRANQADSSQSNEGSGKTSSGNKNTKQGSFEEQLQAVRRASEIKKMIFKGAPTTLVSLIGNKQYKRSAKDIYYFLQSAVCLKQLGYGLLELILITVFPELQEVIINIHEKKKKDPKV | 954 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chma7g09091 | 954 | PANTHER | PX SERINE-THREONINE KINASE PXK | 1 | 949 | IPR051837 | - | |
| Chma7g09091 | 954 | SMART | PX-2 | 485 | 595 | IPR001683 | GO:0035091(InterPro) | |
| Chma7g09091 | 954 | ProSiteProfiles | PX domain profile. | 487 | 599 | IPR001683 | GO:0035091(InterPro) | |
| Chma7g09091 | 954 | MobiDBLite | consensus disorder prediction | 277 | 306 | - | - | |
| Chma7g09091 | 954 | MobiDBLite | consensus disorder prediction | 845 | 867 | - | - | |
| Chma7g09091 | 954 | Pfam | PX domain | 517 | 593 | IPR001683 | GO:0035091(InterPro) | |
| Chma7g09091 | 954 | Pfam | Sorting nexin C terminal | 779 | 914 | IPR013937 | - | |
| Chma7g09091 | 954 | SMART | PXA-3 | 67 | 250 | IPR003114 | - | |
| Chma7g09091 | 954 | MobiDBLite | consensus disorder prediction | 277 | 328 | - | - | |
| Chma7g09091 | 954 | Pfam | PXA domain | 67 | 243 | IPR003114 | - | |
| Chma7g09091 | 954 | MobiDBLite | consensus disorder prediction | 357 | 451 | - | - | |
| Chma7g09091 | 954 | ProSiteProfiles | PXA domain profile. | 67 | 250 | IPR003114 | - | |
| Chma7g09091 | 954 | MobiDBLite | consensus disorder prediction | 383 | 451 | - | - | |
| Chma7g09091 | 954 | Gene3D | - | 491 | 603 | IPR036871 | GO:0035091(InterPro) | |
| Chma7g09091 | 954 | CDD | PX-SNX19-like-plant | 489 | 594 | - | - | |
| Chma7g09091 | 954 | SUPERFAMILY | PX domain | 490 | 596 | IPR036871 | GO:0035091(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chma7g09091 | K17925 | sorting nexin-13 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 43923 | Chma5g06315 | Chma7g09091 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chma | Chma-Chr4:309276721 | Chma7g09091 | Chma-Chr7:305843147 | dispersed | |
| Chma | Chma-Chr5:230042264 | Chma7g09091 | Chma-Chr7:305843147 | wgd |