AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chma7g09226 ATGGGTGGGAATCTTTATTGGGTAAAAAACGATTTTGATGATGAGACTAAATTTGAAGGGGTTGTTGTGGTTTTTTTATGGGCCAGTTTTGTTGATGTTAAAGATTATGTGGAGCTTTATTCTTCGTTTGGATGGAATTCACTTGTTGTTGTCTCTGATTTTCTTAATCCATTTTTCCCTGAGAGAGCCACATCACTTGCTTTTTCCGTCATCAATGAGCTTTTAGAGGAGTTGAGGGCTAGACCATGTCCGTTAGTCCTTGCATCCTTTTCTGGTGGTTCACAAGCTTGTATGTACAAGGTTTTTCAGATCATTGAAGGAACATGTGAAGCACATCTCAGCATGGATGATAGTCGGTTAATCATGACATGTATATCTGGTCAAATGTACGATTCTGGTCCAGTTAATGTTACTGGTGATTTGGGTGCCCGGTTTGCTTTACATTCCTCCAACGTGCCTGGTTCGTCAAAGCTGGTATCAATGGTTGCAAAAGGCGTCACGTCTGGTCTCGATGCTCTATTTCTTACTAGATTTGGATCCCAACGCTCCGAGTACTGGCAAACGCTTTACTCCTCAGTTGGTTTGGGAGCTCCGTTTCTAATATTATGTTCAGAAAGTGATGATCTTGCTCCATATCCAGCTGTTTACACATTTGCTCAACAAGTACAAGGACTAGGAGGACATGTTCGGCTTTTTGGATGGAAGGACTCTCCTCATGTCGGTCACTACAAGCACAATCCCAGGGAGTACAGAGCAGCTGTAAACGAATTCTTTGACCACTCTGTTTCAATATTCAACCAAAAGCTACAACAACTTGCTGAACGGACCGGCATGGAAGGTATGCACGATAAAATATGTGAATTAGTTTGCGACCTACAAAATGCTGCAGTTGACTCAAACCAGAGCCTTAGAAGAGTAGCAGTCGGACCAAATGACCACTTCTTCTTACCAAGCTCAGCTGAATATCAAAGCAGTAAAGAATCTGGATCATTACAAGATGAGCAAAAAGAAAGAAAAGCTGTCCTTTTGGCAAGTCCACCGAGCCTAAATCCACACAGTGTTCTTGGTCAAGTCCTGTTTGATGTTTGTGTGCCTAAAAACATCGAAGGTTGGGATATCAAGTTTGATAATAGGAAGCCGTTTGGGTCTACTTCTCGTAAGGGCTCATCGTTAAATCCCTTAAAACGCATGAGACGATCAAGATTATGA 1209 42.02 MGGNLYWVKNDFDDETKFEGVVVVFLWASFVDVKDYVELYSSFGWNSLVVVSDFLNPFFPERATSLAFSVINELLEELRARPCPLVLASFSGGSQACMYKVFQIIEGTCEAHLSMDDSRLIMTCISGQMYDSGPVNVTGDLGARFALHSSNVPGSSKLVSMVAKGVTSGLDALFLTRFGSQRSEYWQTLYSSVGLGAPFLILCSESDDLAPYPAVYTFAQQVQGLGGHVRLFGWKDSPHVGHYKHNPREYRAAVNEFFDHSVSIFNQKLQQLAERTGMEGMHDKICELVCDLQNAAVDSNQSLRRVAVGPNDHFFLPSSAEYQSSKESGSLQDEQKERKAVLLASPPSLNPHSVLGQVLFDVCVPKNIEGWDIKFDNRKPFGSTSRKGSSLNPLKRMRRSRL 402
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chma7g09226 402 MobiDBLite consensus disorder prediction 319 338 - -
Chma7g09226 402 SUPERFAMILY alpha-beta-Hydrolases 64 260 IPR029058 -
Chma7g09226 402 Pfam Eukaryotic protein of unknown function (DUF829) 125 371 IPR008547 -
Chma7g09226 402 PANTHER UNCHARACTERIZED 6 266 IPR008547 -
Chma7g09226 402 Gene3D alpha-beta hydrolase 145 268 IPR029058 -
Chma7g09226 402 MobiDBLite consensus disorder prediction 382 402 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chma7g09226 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chma Chma-Chr6:275279832 Chma7g09226 Chma-Chr7:308793128 dispersed
Chma Chma-Chr6:275322178 Chma7g09226 Chma-Chr7:308793128 dispersed
Chma Chma-Chr7:308793128 Chma9g06884 Chma-Chr9:224493364 dispersed