AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo13g00132 ATGCCAGGAGCAGTGTGTCAAGATCCTCCTTTTATTGGTGCTGACGGAATCACTTTCTACTTCCATGGAAAGAAGAATAAAGATTTCTGCCTTGTTGCCGACAACAACCTCCACATCGATGGTCACTTCATTTGCAAAAGAAACAAAAACGTGGGCAGAGACTTTACATGGGTCCAATCTATTGGGGTTCTCTTTGCGAATCACAAACTACAAATCAATGATCAAAAGACTGCCACTTGGGATGATGCCATTGACCGTATCTCCATTACATATGACGGGGAAAGCATCCTTCTCCCAGAAACCGAAGGTTTCAAATGGCAATCTTCTACAACCTCAATTACTAGGACACAGGATACAAATGACGTCGTTGTTGAAGATGATAACCTCTTCAAGATCACGGCCAAAGTGGTCCCAATAGCAAAAGAAGAGTCAAGAATTCATAACTATGGTATTACCGATGATGATTGCTTTGCTCATCTTGCTCTCAAGTTAAAGTTCTTCTCCTTGAGTAACGAAGTGGACGGAGTTTTGGGATAG 537 42.09 MPGAVCQDPPFIGADGITFYFHGKKNKDFCLVADNNLHIDGHFICKRNKNVGRDFTWVQSIGVLFANHKLQINDQKTATWDDAIDRISITYDGESILLPETEGFKWQSSTTSITRTQDTNDVVVEDDNLFKITAKVVPIAKEESRIHNYGITDDDCFAHLALKLKFFSLSNEVDGVLG 178
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo13g00132 178 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 1 178 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo13g00132 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr13:5448556 Chmo15g00152 Chmo-Chr15:9121295 dispersed
Chmo Chmo-Chr13:5441084 Chmo13g00132 Chmo-Chr13:5448556 tandem