Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo13g00281 | ATGGAGCTCAGGTGTATACAGTCACCAGTTGTTAGTAGCATACCTACTAACAACAGCAAGCATCAACTAGTACAATGCTACGGTCAGTCTATTCGATCTTTTGGAACGAAAAAAGGTGTTCTTGAAACGAATGGGGCGAAGGTTAAATATGCTCGGTTTAGTGTTCGAGCATCAGCAGCAGTTGGTTCAGTGCCTGCTGAAACAAGAACACAAGATGGCGAAAAAGACGGAGATCCAGTATTTGTTGCAGGAGCAACTGGAAAAGTTGGTTCCCGAACAGTAAGGGAGCTTTTGAAATTAGGATTTAATGTCCGAGCTGGTGTAAGGAGTACTCAAAGAGCAGAATCTCTGGTGAAAAGTGTGCAGCAGATGAAGCTTGATGATGGAAGTCAGCCTATAGAGAAGCTTCAGCTAGTGGAGTGTGACTTGGAGAAACCGGAGCAGATTAAGGCGGCATTGAGCAGTGCTTCAACAGTTGTATGCTGCATTGGAGCGAGTGAGAAGGAGATATTTGATGTCACTGGACCATACCGAATTGACTTTCTAGCCACAAAAAACCTCATTGACGCAGCTGCTGCTGCAAAAGCGAAACACTTTATTCTGGTTACTTCTTTGGGAACAAACAAGTTTGGATTTCCTGCTGCTGTATTGAATTTGTTCTGGGGAGTCCTATGCTGGAAAAGGAAGGCTGAAGAAGCACTTCTGGCTAGTGGAATTCCTTATACTATAGTGAGACCTGGAGGTATGGAGCGTCCTACAGATTCTTTCAAGGAAACACATAATCTTACTCTCGCTACAGAAGATACTTTATTTGGTGGTCTTGTATCAAATCTACAGGTGGCAGAACTCCTTGCATTTATGGCTAAAAACCCAACTCTCTCATATTGTAAAGTACTGGAAGTAGTTGCCGAAACAACAGCACCATTGACCCCCTTTGGGGACCTTTTAACAAAAATACCATCTAAACGTGCTGTACCTTTACAGCCCAAGGAACCTGAAGCTACCAAAGAATCTGAACCTGAACCTGCACCTGCACCTGTTCCTGAAACTGAAATCATTGCCACTGAAACGCCATCCGTGTCTAAGCCAGTTGCCACACGACCACTGTCCCCGTACACAGCTTATGAAAACTTGAAGCCACCAACCTCTCCAATCCCAACACCAAGTGGATACCAAAAGAAACCAGAAGTTGCACCAGAAGCTGTACCAAAAGTTGCAACATCAGAAGTTGCACCAGAAGTTGCACCAGAAGCTGTACCAGAAGCTACGACAGCCGTTGACACTGTTACAAAGATTGAAGACGTAAGTGATATCAAAGAGGATCCTCCTCAAGTGGTGACATCCAACAGCAGGTCCCCTTACTATGTATATGAGACTCTGAAGCCTCCTTCGTCGCCAAATCCAAGTCCTCCATCGGTATCACCACCACCAATCGTCCCTGTCGACAATGGGTCCCCCATTGCTTCCACACCAGAAAGCACCTCAGCTCAATCCACCGTGAAGCCAAGACCACTTTCACCTTACTCCATGTACGAAAGTTTGAAGCCTCCAAGTTCTCCTACTCCTTCCAAACCACATTAA | 1581 | 45.35 | MELRCIQSPVVSSIPTNNSKHQLVQCYGQSIRSFGTKKGVLETNGAKVKYARFSVRASAAVGSVPAETRTQDGEKDGDPVFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAESLVKSVQQMKLDDGSQPIEKLQLVECDLEKPEQIKAALSSASTVVCCIGASEKEIFDVTGPYRIDFLATKNLIDAAAAAKAKHFILVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLATEDTLFGGLVSNLQVAELLAFMAKNPTLSYCKVLEVVAETTAPLTPFGDLLTKIPSKRAVPLQPKEPEATKESEPEPAPAPVPETEIIATETPSVSKPVATRPLSPYTAYENLKPPTSPIPTPSGYQKKPEVAPEAVPKVATSEVAPEVAPEAVPEATTAVDTVTKIEDVSDIKEDPPQVVTSNSRSPYYVYETLKPPSSPNPSPPSVSPPPIVPVDNGSPIASTPESTSAQSTVKPRPLSPYSMYESLKPPSSPTPSKPH | 526 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo13g00281 | 526 | FunFam | Protein TIC 62, chloroplastic | 76 | 322 | - | - | |
| Chmo13g00281 | 526 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 79 | 318 | IPR036291 | - | |
| Chmo13g00281 | 526 | MobiDBLite | consensus disorder prediction | 463 | 482 | - | - | |
| Chmo13g00281 | 526 | CDD | SDR-a5 | 79 | 305 | - | - | |
| Chmo13g00281 | 526 | MobiDBLite | consensus disorder prediction | 323 | 526 | - | - | |
| Chmo13g00281 | 526 | Pfam | NAD(P)H-binding | 84 | 291 | IPR016040 | - | |
| Chmo13g00281 | 526 | Gene3D | - | 78 | 322 | - | - | |
| Chmo13g00281 | 526 | MobiDBLite | consensus disorder prediction | 486 | 504 | - | - | |
| Chmo13g00281 | 526 | PANTHER | PROTEIN TIC 62, CHLOROPLASTIC | 1 | 474 | IPR044719 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo13g00281 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:12367169 | Chmo24g03127 | Chmo-Chr24:218772395 | dispersed | |
| Chmo | Chmo-Chr13:12367169 | Chmo23g03222 | Chmo-Chr23:222335610 | transposed |