AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo13g00315 ATGGGAACACTTGCTGGTCATCTAGTCCCTGGTTCAGTCTTAGCTCTTCTTGGCATATGGCACATCATCAATACAATCCGATCCTACCACCTAAAAGGCCCGACCCATTTCAGGACAAGCTTTTGGCACCCGTTTACGAGCCTGTCTTCCAAGCTTGCATACATGGAGCTTTTTCTTATTCTTTTTTTCTCCATATTTTCAATAGTTATGCAGGTTTTGGACTACCCTTTATTCTCATTCGAATTCAAGCTCAATAACTACGAGCATGCCACCATGTTTCTTCACTTGGTTATATATTCTGGTTTTACCCTTTTAACCGAGTTAACTCATAAATCTGACATCTTATTTGAGGTTTCTGGAATTCTTGCTGCTTCGGTTTTTGGTCAAGAGCTTTTCTTACTTTATTATCATTCAGCTGATCATGTTGGCCTTGAGGGTCACTACCATTGGCTAATGCAACTTATTGTGATCGTTTCTCTTTTAACAACTTTAATTGCCACCATGTTTCCATCAAGTTTTAGTTCATCACTTGTTCTTTCTATGTCAGTGGCGTTTCAGGGCTTTTGGTTCATTAACATGGGATTTATGTTATGGGTTCCTGAGCTTGTCCCTAAAGGGTGCACCTTACGGTTGGGACATGGTGGTGATAGTGATATGCACGGGGCGGTTGTGTGTGGTAACCATGAGGCGGTGTCAAGGGCTACAGGATTAGCTAATCTGCAATTCAGTTGGATACTTGGTGGGATTATGATATTTGTGGGATGTTTATGTTTATCTTTCCCCAAAAAGGTAACTAACAGGGCTCAGTCAATTGAGTATGAAAGACTTAATAGCCGAGTTGCTGAGATCCCTCTTTCGGTAGCCGGTTTCAAGCAAGTTACTTACCCATAA 891 41.41 MGTLAGHLVPGSVLALLGIWHIINTIRSYHLKGPTHFRTSFWHPFTSLSSKLAYMELFLILFFSIFSIVMQVLDYPLFSFEFKLNNYEHATMFLHLVIYSGFTLLTELTHKSDILFEVSGILAASVFGQELFLLYYHSADHVGLEGHYHWLMQLIVIVSLLTTLIATMFPSSFSSSLVLSMSVAFQGFWFINMGFMLWVPELVPKGCTLRLGHGGDSDMHGAVVCGNHEAVSRATGLANLQFSWILGGIMIFVGCLCLSFPKKVTNRAQSIEYERLNSRVAEIPLSVAGFKQVTYP 296
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo13g00315 296 Pfam Family of unknown function (DUF716) 118 257 IPR006904 -
Chmo13g00315 296 PANTHER PROTEINASE INHIBITOR I4, SERPIN (DUF716)-RELATED 1 280 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo13g00315 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
226107 Chmo14g00337 Chmo13g00315
228763 Chmo13g00315 Chmo14g00337
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr13:13871126 Chmo18g04852 Chmo-Chr18:329378053 dispersed
Chmo Chmo-Chr13:13871126 Chmo14g00337 Chmo-Chr14:14067017 wgd