Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo13g00551	ATGACCGAAACCCTAACTCCCAACCGTACACCAGGCCACAAACAAAGACCACAAATCCTATCACCCGACCGACCGCTCTTCCTGGGCTCCAACGATGACAAGCTCGAACGTGCTAAAGCACGCGCCGCACGCGCTGCCGCTATCCGTCGAAAACCGGTCGCTGCTCGTCAAGCGACCGACTCGACGGATCCGCCGTGTCTTGGTCAGGAGCAGATTATGGAGTTGTTTCAGAACTGCATCAAATTAGCTAGTGAAAATAAAATAAATCAGAAGAATACGTGGGAGTTGAATTTGATTGATCATTTATGCGATATTATTAAAGTCGAAGAGGAGAATGACGTCGAGACCAATTTTCAGAAGGCAAGTTGCACTCTTGAAGCTGGAGTTCGAATATACTCAATGAGGGTGGATTCAGTCCATTCTGAAGCATATAAGGTTCTCGGAGGGATTAGTCGAGTTGCACTGGACTCCGAACAAGATAATGCAGATGATGTCAACACAGACAACATGCCAGGAGAACGCACCACAAAGAAGGAGAAGGAACACAAGTTATCTCCTTTAACGACATTGGAATCATCCTTTGAGGCTCTTAATGTAAAAAAGTTTGATGTTGCATTTGCTGTGGATCCTCTGTATCATCAAACAACTGCCCAGTTTGATGAAGGCGGATCAAAAGGTCTTTTACTGAATAACCTTGGAGTCTATGGTGGCTGCCGAATGGTTTTTGATTCGCTAGAAGTACCCGGGAAGTGCATGTCATGCTCAAGTGACCATGATAAAGCACATACTATTGATATATCTTATGCCAAAGATTGTATGGAACAAATGGTATCAAACTTCTCAAAGAAACTTGAAATATCACCATCTCTAAGGGCTATAGTCAATATGTTTGATGAAGATAATAGAAGACCAGCAGATACCTTTTCGTCTTCCCAAAACTCTGTAGAACCCGATTTTGAAGCTTACGATGATAATGCATATAATGAAGGTGGACATGATGAATCTTCAACCTGGGACTATGTTAATGATAATCAGGCAAGTGTGCAAGATGAGGGCGCATATGAAGGAGATGAAGAACTCTTTGCACCGGTTCATCATGAGGAGAACGAGCCATATGCTTCTCAAAATGGTGAAGTAGATGACAAATTTGCAACAGTTGATAGCTTTCTGTTTCTAAGTCTTGGCTTAAATGGAAAACAAAATGCATGGGCGGGTCCCGAGCATTGGAAATATAGGAAGATTAAAGGTGTAGAAGACCCTGTTAAGGAAAACGGATCGTCACCAGTAATGGCGAAAAAACCAAGGAATAAGAAACAAGCCGAACCTGAAGTAGAATTTATGAAAGCATTGGATTTGGAAAGTGACATGGATAGTATCTTTGCTCCTCCTAAAAATCCAAGAACACTGTTGTTGCCTGCAAATAGGGAACCCGGTAACACCACACTTCCAGAGGATTGCCATTATCAACCAGAAGACCTTGTGAAGCTATTTTTTCTTCCAAATGTTATGTGCCTTGGAAAGAGAGGAAGGAGGCATTCAGATGAAGCTGGTCAACAAGGAGAAGGGAATAACGAAGCATTTGCGTCTTGGGATGATGAATGTGGGCAATTTGATGATGGAAATGCTTACGGTGACGTTGAGGACTCTACCACACTTGTCTCTCAGCCTCGTCAGGTAAATAAGATTGAAGTTGAGTATGACAAAACATCTAAGCAAGTTGATGTTCAGGCACTCAAAGAGACTCTTTGGTCATCTATGCAAGAAACACCTGAAACAAAGACATTGTCTTTTAAGCACTTATTGACATCTTTTCCAGCGGATAAGAAGCCGGCTGCTGCATCCATTGATGTCATCTCTCCACACCTTTGTTTCATTTGCGTGTTACATTTGGCTAACGAGCATGGATTGAGCATCCATGGTTGTGCTAACTTGGATGACCTCACAATACACCTCCCGCTCGAAGTGGTCTAA	1971	42.87	MTETLTPNRTPGHKQRPQILSPDRPLFLGSNDDKLERAKARAARAAAIRRKPVAARQATDSTDPPCLGQEQIMELFQNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDVETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVALDSEQDNADDVNTDNMPGERTTKKEKEHKLSPLTTLESSFEALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMVFDSLEVPGKCMSCSSDHDKAHTIDISYAKDCMEQMVSNFSKKLEISPSLRAIVNMFDEDNRRPADTFSSSQNSVEPDFEAYDDNAYNEGGHDESSTWDYVNDNQASVQDEGAYEGDEELFAPVHHEENEPYASQNGEVDDKFATVDSFLFLSLGLNGKQNAWAGPEHWKYRKIKGVEDPVKENGSSPVMAKKPRNKKQAEPEVEFMKALDLESDMDSIFAPPKNPRTLLLPANREPGNTTLPEDCHYQPEDLVKLFFLPNVMCLGKRGRRHSDEAGQQGEGNNEAFASWDDECGQFDDGNAYGDVEDSTTLVSQPRQVNKIEVEYDKTSKQVDVQALKETLWSSMQETPETKTLSFKHLLTSFPADKKPAAASIDVISPHLCFICVLHLANEHGLSIHGCANLDDLTIHLPLEVV	656

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo13g00551	656	MobiDBLite	consensus disorder prediction	512	531	-	-
	Chmo13g00551	656	MobiDBLite	consensus disorder prediction	1	15	-	-
	Chmo13g00551	656	MobiDBLite	consensus disorder prediction	170	184	-	-
	Chmo13g00551	656	MobiDBLite	consensus disorder prediction	420	442	-	-
	Chmo13g00551	656	Pfam	Condensin complex subunit 2	24	529	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Chmo13g00551	656	Pfam	Condensin complex subunit 2	545	649	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Chmo13g00551	656	MobiDBLite	consensus disorder prediction	1	32	-	-
	Chmo13g00551	656	MobiDBLite	consensus disorder prediction	159	184	-	-
	Chmo13g00551	656	PIRSF	Condensin-H	1	550	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Chmo13g00551	656	PIRSF	Condensin-H	530	653	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Chmo13g00551	656	PANTHER	CONDENSIN COMPLEX SUBUNIT 2	15	651	IPR022816	GO:0000796(InterPro)\|GO:0000799(PANTHER)\|GO:0003682(PANTHER)\|GO:0007076(InterPro)\|GO:0007076(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo13g00551	K06676	condensin complex subunit 2

Event-related genes

Select	Gene_1	Gene_2	Event_name
	225869	Chmo13g00551	Chmo14g00533
	226163	Chmo15g00392	Chmo13g00551
	238903	Chmo13g00551	Chmo15g00392

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr13:24981101	Chmo15g00918	Chmo-Chr15:53015797	dispersed
	Chmo	Chmo-Chr13:24981101	Chmo14g00533	Chmo-Chr14:22162214	wgd
	Chmo	Chmo-Chr13:24981101	Chmo15g00392	Chmo-Chr15:20427462	wgd
	Chmo	Chmo-Chr13:24981101	Chmo22g04692	Chmo-Chr22:287880623	wgd
	Chmo	Chmo-Chr13:24981101	Chmo23g04647	Chmo-Chr23:279816826	wgd
	Chmo	Chmo-Chr13:24981101	Chmo24g04641	Chmo-Chr24:283382790	wgd