Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo13g00690 | ATGTCATCCCAACCTCCAATTGACACCAACAACAACTCAAACACCAAATCCGAACATGAAACAACCACACTCGCCTTCCACAAAAAACGAGCTCGTCGCGTAAGCTTCGCCGAAAACACATCCGTACACATCTTTAACCGCGACGAAGACTCCGGTACTCCCGTAAACGCGAAACAACCACCGTCTGTTGAGAATGAGTATTCTGACGAACCTAAGTTTTGGAATGATAATGATAATGATAATGGAAATGATGAGGGTGTGGAGGAGGATGAGGATGAGGATGTGGATATGGAGGATGATATGGATGAATCCGGTGGCTCGAGAAGTCCGTTTTTGCGATTGGTTGGGTCGTCGCCGTCGTCCGGTGGGAGTACTTTTGGTTCGGCTACCTCAAATGATGAAGATAATTTTTTTGGTCCTGTATCGACAAACTTCATTAGACGAGATATACTGGACCGTGAAGCTTCTGACGGAAATCATGATCAGACTATGGATTCAACAGCCTTTTCGATGCATTTTCGTAGCATTGCTAGGTCAGACTCAGAAGTGGAGTTGAAGACCTCAACAGGGGTTCACCTTTCCTTTGAGAAGAAAACCCCAAATCAAGATTCAAATCCCACACATACAGGAAGCTTAATGCTTATGACACAAGCTAAGAAGCCAAATCATCAACCTTCGGTTTCTACCTCGAAACTACACACTTCATCCGAGTCTAATGATATGAGTATTGTTGGAGAATATCGTTATAAATATGACTATGGAGAACTATCTCCGACATTGGATGCACTCTTGGCTGAAGGCAATAAGGATTTGCGTGTGATCGCTGCTTCTAAAGATACTATCCTGAAATCACCAAGAATGGTTGCAGCAACCGAAGAGTATGGGGCTAACCTCATGGATTTTAGTTGTAGTGAAGATAATAATAATCTAGAAGGGATTATTACTCATGAAATGGTCAATGAAGATGTTGCCCCTAAGCATAATCAGCTTGGTGTGGTCAATGACGGATCAAATATATCTTCCAATAAGGAGATGCCTTTAGATGTCTTATCTGAGGCTGAGAATCATTTGTCCTCTGGTTCTTCTATTTTGGTTACCCCAAATGCTAAGACAACAGATCTTGTCAAAGATGCAGTTCAGAGAAAGTCAAGCTTGGACTTCATTGCTACCAGTCAAAGCAATCCTAATCAACATCAACCTCCTTTTGTAGGGGCAGTGAACTCTTTGACTGATGAGTCTAGTCACATGCATTTCAATGGTGTTAGTCCATCTAAATTACCATCTGCTGTGACTCCTCTTCATAATTATTCAAGTGTTTTTGTAAGAACAGATACCCCGAAGCATAGTCGGAGTGTTTTATCCATACAGAAAAGCATTTCTAAACTCAAAATGCTAAACGCTTCTCCCTTTTCTGCTGATTTGACTGCTAAACTTGAAGATTCAGCTTCCCGATCTGTACACAGCCCCTCTAAGATGACTCCTAATACTTCGTTGGAGAAAAACCATAAAGCTTCTTTACTTAATTATATGGATGATAGTGGACAATTATCATCTGCCATTCAGAAGAAGAGAGAAAGAGCAAGTTCAACAACTATGGATGATGTTAGGTTGCAGACCCCAAAGAATGCTGTCCCTGTAACTCATATGCAAAATGTTGTCAAAATTGCATCACCTTTATTAATACCACCTGAAAACGAATTGTCTGGAGAAAAGTTGCAGACAGAACTCTTGTCATCGGCAGATATCCAAAATGGTTATGAATATGATAAAGACAAATTTAATTTACCTCAAAGTTTTGGCTATTCTCCACAGAAGAAGTTAAAGATTGTGAATACATCAGAATTCAGAAGCAGTCCTCTGATAGATGCAAAGCAATTTGCCAAACACAATGAACCGGGGGAAAACATTACTAATGCAAGTCTTTCTGCTAGTGCTGCTGACAAGACCAATGCCTTGTGCATTGAGACGTTAGAAATAGATAGTTCGGAAATGTCCACTGAAGAAGAAATGGTGGATATCAGAGAGGTTTCTCTCAGTGAGGCGGGTGGTAACTTAGAAACAAAGGAGAATGCTACAACGGTATTGAAGGATGATCAGCATGCGCTGATTCAACCTAAGTTTATGGAAAGTGATATTGCCAGGGGAGAGTCCAGACGAGCTTCCCCGGTTTTGGAAGAAAAGACAGATAAACAATCTTGTCAAAAGAATTTGCATGACGCGGTTTGTCAAAGTCCCTCAAATAAACAGCCATATGATGTGAACGTTGATTTCATACCGGCGGAAAATGTACCGTCGCCAAGTCCTCATCGCTTATCAAATGGAGATATAATCTCTGAGCAGGGAAGAAAGACTATATTTGGGGTGGTTGAGAGAACTGCTAGAACTCAGAGGAGTTCAAATATCCCAAAAAGTCATGTTGGCACCAAAGTCTCAAGTGACAATGAGATATCAATGATTGTACACACTTTTATAAATGCAACTGAGATGACTGCAATGCTCTGTAGAGAAACGAAAGAACTTATACCTCAATCAGCTGATAAGTTCAACTTGCATGCGATTGATTGTCTGACAAGCATCATAGATCAGCTTCTGAAAGCAAAAACATATCAGCTTCTTTCTGACGAAATCAAATCTCAGAAAAGTGTAGATGCCAGTAAATACATTGCACACAAAAGAGCCGCAGAGATGAAACTACTTGTGTGCAAATTAGTGCATGAGAAAGCAAAGTTGCGGCTACTGAATGTGAAGCAGGAGAGGTTGCTGGAAAGGGTAGATTCAGTTTCCTCCGGTATATTGGAGTCCGAGGAATTAAGGTTGATTTTTCCACCACAACAATCTTCACTTGTCCATTGCAAGTCCTTTTCAGTCAACATGAACAACCTTCATGAGAGCCAGATTGACAGTGGCAAAGTGACGTCAATGGAGCAAACAGTTGATCATATCGATAGAAGAATTGCAAACTTGACCAAATCATTTCACAAGTCATGTAAGATGAAGGGAGAACCCAGCGCCCATGACACTATTGCATTTGTTAATGATTTTGTGAAGAAGCGAGCATGCTGCCACATCATACGAAAGGATCTACAGCTTTGGACTGTAGACCATTTTGAGGTGGGAAATGGCTGCCGCAATGTTAATCTCAACTACCTCGACCTGATAACTCAAAGGTTAACAGTCAAAACTGGTCCTGTCCCAAGCATTTCTGTTTCACACGAGTTACATAAAGCGAACATCAGCAAGATCTTCAATGACATGGATGCTTGTGCTGCATTCGAATTTGTCTTTTATGCTGGAATGATGCAGAACCATGCCGATGCTACAAGCTTAGCTCAAGCAACTCAAGTGACTGGTTCTCGTTTGGGCAGTTTGTTAGATGTGTTGGAAGAGATACAACATGCAAGAATAGAGCCAAAAAACTTGATATCTGCAAGATTTCACACACCCAAAGCTGAGCAACTTGACCTTGAACTCTGCTTTTTTGATTCAACAAATCGTAGGCAGGCAACAGTTACATTAGACGCATCATGTTTGGCAAGGGGCATCTATCCTTCAGAAATTGTACCGTATCAGGTTGACATTCCTATTGATGAGCCACAAAGCTCTTCTCCGTCGCTTTCAGCTGAGATTGCATCAGCATTTCAAGATCTTAAAGTGGGATATTTAAGGATTCAACGGTTGTGTACATGCATTTCCAAGTTAATCGGCCCTCCAAGCAGGTACTTGATGCAAGGTTCGAGTTAG | 3741 | 41.25 | MSSQPPIDTNNNSNTKSEHETTTLAFHKKRARRVSFAENTSVHIFNRDEDSGTPVNAKQPPSVENEYSDEPKFWNDNDNDNGNDEGVEEDEDEDVDMEDDMDESGGSRSPFLRLVGSSPSSGGSTFGSATSNDEDNFFGPVSTNFIRRDILDREASDGNHDQTMDSTAFSMHFRSIARSDSEVELKTSTGVHLSFEKKTPNQDSNPTHTGSLMLMTQAKKPNHQPSVSTSKLHTSSESNDMSIVGEYRYKYDYGELSPTLDALLAEGNKDLRVIAASKDTILKSPRMVAATEEYGANLMDFSCSEDNNNLEGIITHEMVNEDVAPKHNQLGVVNDGSNISSNKEMPLDVLSEAENHLSSGSSILVTPNAKTTDLVKDAVQRKSSLDFIATSQSNPNQHQPPFVGAVNSLTDESSHMHFNGVSPSKLPSAVTPLHNYSSVFVRTDTPKHSRSVLSIQKSISKLKMLNASPFSADLTAKLEDSASRSVHSPSKMTPNTSLEKNHKASLLNYMDDSGQLSSAIQKKRERASSTTMDDVRLQTPKNAVPVTHMQNVVKIASPLLIPPENELSGEKLQTELLSSADIQNGYEYDKDKFNLPQSFGYSPQKKLKIVNTSEFRSSPLIDAKQFAKHNEPGENITNASLSASAADKTNALCIETLEIDSSEMSTEEEMVDIREVSLSEAGGNLETKENATTVLKDDQHALIQPKFMESDIARGESRRASPVLEEKTDKQSCQKNLHDAVCQSPSNKQPYDVNVDFIPAENVPSPSPHRLSNGDIISEQGRKTIFGVVERTARTQRSSNIPKSHVGTKVSSDNEISMIVHTFINATEMTAMLCRETKELIPQSADKFNLHAIDCLTSIIDQLLKAKTYQLLSDEIKSQKSVDASKYIAHKRAAEMKLLVCKLVHEKAKLRLLNVKQERLLERVDSVSSGILESEELRLIFPPQQSSLVHCKSFSVNMNNLHESQIDSGKVTSMEQTVDHIDRRIANLTKSFHKSCKMKGEPSAHDTIAFVNDFVKKRACCHIIRKDLQLWTVDHFEVGNGCRNVNLNYLDLITQRLTVKTGPVPSISVSHELHKANISKIFNDMDACAAFEFVFYAGMMQNHADATSLAQATQVTGSRLGSLLDVLEEIQHARIEPKNLISARFHTPKAEQLDLELCFFDSTNRRQATVTLDASCLARGIYPSEIVPYQVDIPIDEPQSSSPSLSAEIASAFQDLKVGYLRIQRLCTCISKLIGPPSRYLMQGSS | 1246 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo13g00690 | 1246 | MobiDBLite | consensus disorder prediction | 21 | 36 | - | - | |
| Chmo13g00690 | 1246 | MobiDBLite | consensus disorder prediction | 111 | 138 | - | - | |
| Chmo13g00690 | 1246 | MobiDBLite | consensus disorder prediction | 1 | 138 | - | - | |
| Chmo13g00690 | 1246 | MobiDBLite | consensus disorder prediction | 713 | 732 | - | - | |
| Chmo13g00690 | 1246 | Pfam | Knl1 RWD C-terminal domain | 974 | 1126 | IPR040850 | - | |
| Chmo13g00690 | 1246 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Chmo13g00690 | 1246 | MobiDBLite | consensus disorder prediction | 81 | 101 | - | - | |
| Chmo13g00690 | 1246 | PANTHER | OS06G0608100 PROTEIN | 1 | 1234 | - | - | |
| Chmo13g00690 | 1246 | MobiDBLite | consensus disorder prediction | 217 | 238 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo13g00690 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 46180 | Chmo13g00690 | Chmo22g04835 | |
| 46181 | Chmo13g00690 | Chmo23g04792 | |
| 46182 | Chmo13g00690 | Chmo24g04800 | |
| 225904 | Chmo13g00690 | Chmo14g00681 | |
| 226203 | Chmo15g00556 | Chmo13g00690 | |
| 238943 | Chmo13g00690 | Chmo15g00556 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:32341236 | Chmo21g00009 | Chmo-Chr21:713702 | dispersed | |
| Chmo | Chmo-Chr7:234651279 | Chmo13g00690 | Chmo-Chr13:32341236 | transposed | |
| Chmo | Chmo-Chr13:32341236 | Chmo14g00681 | Chmo-Chr14:30494754 | wgd | |
| Chmo | Chmo-Chr13:32341236 | Chmo15g00556 | Chmo-Chr15:29072192 | wgd | |
| Chmo | Chmo-Chr13:32341236 | Chmo22g04835 | Chmo-Chr22:293114297 | wgd | |
| Chmo | Chmo-Chr13:32341236 | Chmo23g04792 | Chmo-Chr23:285648795 | wgd | |
| Chmo | Chmo-Chr13:32341236 | Chmo24g04800 | Chmo-Chr24:289132666 | wgd |