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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo13g00702 ATGGCGTCTTTGCAGCTAACACCTCTGTCAACTCGCACAGACTACCTCTCTTTACCAGACATCAAAGTCTTCTGGTGCCAGAAATCGCCGTTAACAATCCTATGCTCCGACAGAGAATCAACTAAGGATTTTGATGCGAAGCAAAAGATTGTTGTGAAGGTGACGATGATGAACAATGACAAGAAATCTCGTAAGGCTCTGAAGATTGCCGTTGGTCTATCTGGTGTTGAATCGGCATCTTTCGTTGGATCAGACCAGATAGCAGTGACGGGAGAAGGTATTGACTCGGTCAAATTGGCAACTTTGCTAAGGAAAGGTGTAGGATACACAGAGATAGTGACTGTTGGTAACGTGGAAGAGAACAAACCCGAGGACAAGGAAACAAAGCCAACCGAGACATGGCAAATTAATCCTTACGAGTATTACTATAATTGGTATGGGATGCCACGTTATTATTAG 459 43.79 MASLQLTPLSTRTDYLSLPDIKVFWCQKSPLTILCSDRESTKDFDAKQKIVVKVTMMNNDKKSRKALKIAVGLSGVESASFVGSDQIAVTGEGIDSVKLATLLRKGVGYTEIVTVGNVEENKPEDKETKPTETWQINPYEYYYNWYGMPRYY 152
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo13g00702 152 PANTHER OS04G0464100 PROTEIN 48 133 IPR044296 -
Chmo13g00702 152 Gene3D - 43 121 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo13g00702 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
225908 Chmo13g00702 Chmo14g00694
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr13:33169273 Chmo13g00702 Chmo-Chr13:33426958 dispersed
Chmo Chmo-Chr13:33426958 Chmo14g00692 Chmo-Chr14:31690115 dispersed
Chmo Chmo-Chr13:33426958 Chmo13g00704 Chmo-Chr13:33511953 proximal
Chmo Chmo-Chr13:33419775 Chmo13g00702 Chmo-Chr13:33426958 tandem