AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo13g00704 ATGGCAAAGCAAAAGATTGTTGTGAAGGTGACAATGATGAACAATGACAAGAAATCTCGTAAGGCTCTGAAGATTGCCGTTGGTCTATGTGGAGTCGAATCAGCATCTTTGGTTGGATCGGACCAGATAACAGTGACGGGAGAAGGTATTGACTCGGTGAAATTGACGACTTTACTAAGGAAAGGTGTAGGATACACAGAGTTAGTGAGTGTTGGTAACGTGGAAGAGAAGAAACCCGAAACGAAGCCAACCGAGGTGACATGGCAAATTAATCCTTACGACTATTACAATAATTGGTATGGGACGCCACGTTATTATGGTTATTAA 327 42.2 MAKQKIVVKVTMMNNDKKSRKALKIAVGLCGVESASLVGSDQITVTGEGIDSVKLTTLLRKGVGYTELVSVGNVEEKKPETKPTEVTWQINPYDYYNNWYGTPRYYGY 108
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo13g00704 108 Gene3D - 1 77 - -
Chmo13g00704 108 PANTHER OS04G0464100 PROTEIN 4 85 IPR044296 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo13g00704 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
226204 Chmo15g00568 Chmo13g00704
238944 Chmo13g00704 Chmo15g00568
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr13:33208067 Chmo13g00704 Chmo-Chr13:33511953 dispersed
Chmo Chmo-Chr13:33511953 Chmo14g00694 Chmo-Chr14:31752296 dispersed
Chmo Chmo-Chr13:33426958 Chmo13g00704 Chmo-Chr13:33511953 proximal