Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo13g00731 | ATGAGATATGCAGGAGTTTTTGGATCTGTGGTTGTGGTTTTATTTTCTATGTATTTCTATCCATTGCGGCATAATCTCATCAATAAAACTTATCTATGTAGTCAGGATACTTGTAAATATTCAGGCATCATTGAGGACTGCTGTTGTGACTACGAGAGCGTTAACAATGTTAATGGAGCAATTTTACATACCTTGTTGCAACAGCTTGTTACAACTCCCTTCTTCCGATATTTTAAGGTGAAGTTATGGTGTGATTGCCCCTTCTGGCCTGATGATGGAATGTGCCGTCTGCGTGATTGCAGTGTATGTGAGTGTCCAGAACATGAATTCCCAGAATCTTTTAAGAAACCATCACCGTATATTCTTCCAAAAGATGATCCTGTATGTCAAGAAGGAAAGCCGGAGGCTACAGTTGACCGTACTCTGGATGCTAAGTCTTTTAATGGCTGGGTTGAAATAGATAATCGATGGACTCATGATGATGAAACTGATAATGGTGAAATGACGTATGTGAACCTGCAATTGAACCCTGAACGTCATACGGGTTACACAGGGCCATCAGCAAGAAGAATATGGGATGCTATATACTCAGAATATTGTCCAAGATATGCATATGGAGAGACGTGCCCTGAAAAGAAAGTACTATACAAGCTAATATCTGGTTTGCACTCCTCAATTTCTATCCATATAGGTGCAGATTATCTACTTGACGAGAGTAGCTATAAGTGGGGTCCAAATCCTGAATTGATGTATAATCGTGTCTTGAAACATCCTGATCGTGTGGAAAACTTGTACTTCACTTTCCTGTTTGTTCTTAGAGCTGTGATAAAAGCGGCTGCTTACCTGGATCAGGCCGAGTATGATTCTGGTAACCATGTGGAGGATCTTAGAGCCCAATCCTTAATTCGACAAATGGTTCACAATTCTGAACTGCAAGCTGCATGTGCTCTTCCATTTGATGAGGCTGAGCTGTGGCAAGGCCAAGGTGGACCCATACTCAGGCAACAGATCCAAAATCAGTTTCGAAACATCAGTGCACTAATGGACTGTGTAGGATGTGAGAAGTGTCGTCTTTGGGGAAAACTTCAAGTTCTTGGTCTTGGAACTGCATTGAAGATTCTGTTCTCTGTCGATGATCAGAGTAACCCGGACCCACATCTGCAGTTACAAAGAAATGAAGTGATTGCTTTAATTAATCTACTAAATCGGCTATCAGAATCCCTTATATATGTTACTACAATAAAACTACCCACTACAGATATCAGTTTGATTAACCAAGCTTGGGGAGTGATGGCTCCTTGGTGGAAGAACCTGTCAAAAGCTAACTGA | 1329 | 41.08 | MRYAGVFGSVVVVLFSMYFYPLRHNLINKTYLCSQDTCKYSGIIEDCCCDYESVNNVNGAILHTLLQQLVTTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPEHEFPESFKKPSPYILPKDDPVCQEGKPEATVDRTLDAKSFNGWVEIDNRWTHDDETDNGEMTYVNLQLNPERHTGYTGPSARRIWDAIYSEYCPRYAYGETCPEKKVLYKLISGLHSSISIHIGADYLLDESSYKWGPNPELMYNRVLKHPDRVENLYFTFLFVLRAVIKAAAYLDQAEYDSGNHVEDLRAQSLIRQMVHNSELQAACALPFDEAELWQGQGGPILRQQIQNQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVDDQSNPDPHLQLQRNEVIALINLLNRLSESLIYVTTIKLPTTDISLINQAWGVMAPWWKNLSKAN | 442 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo13g00731 | 442 | PIRSF | ERO | 7 | 439 | IPR007266 | GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Chmo13g00731 | 442 | Pfam | Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | 62 | 409 | IPR007266 | GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Chmo13g00731 | 442 | PANTHER | ERO1-RELATED | 23 | 415 | IPR007266 | GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(InterPro)|GO:0015035(PANTHER)|GO:0016972(InterPro)|GO:0034975(PANTHER)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Chmo13g00731 | 442 | SUPERFAMILY | ERO1-like | 49 | 416 | IPR037192 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo13g00731 | K10950 | ERO1-like protein alpha [EC:1.8.4.-] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 46188 | Chmo13g00731 | Chmo22g04857 | |
| 46189 | Chmo13g00731 | Chmo23g04808 | |
| 46190 | Chmo13g00731 | Chmo24g04818 | |
| 225917 | Chmo13g00731 | Chmo14g00721 | |
| 226214 | Chmo15g00604 | Chmo13g00731 | |
| 238954 | Chmo13g00731 | Chmo15g00604 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:34819425 | Chmo1g00765 | Chmo-Chr1:40592967 | dispersed | |
| Chmo | Chmo-Chr13:34819425 | Chmo14g00721 | Chmo-Chr14:32916922 | wgd | |
| Chmo | Chmo-Chr13:34819425 | Chmo15g00604 | Chmo-Chr15:32005621 | wgd | |
| Chmo | Chmo-Chr13:34819425 | Chmo22g04857 | Chmo-Chr22:293655845 | wgd | |
| Chmo | Chmo-Chr13:34819425 | Chmo23g04808 | Chmo-Chr23:286054727 | wgd | |
| Chmo | Chmo-Chr13:34819425 | Chmo24g04818 | Chmo-Chr24:289608385 | wgd |