Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo13g01000	ATGGCATCAATGACAACAGCTTTCACCTCACCACTCTACACCAAAACCCAATCATCCTTCTATGGAGTCCCGGTCACATCTCCTGTTAGAATGATCCAACCAGTCAGATCATCCAACAAAACAAACACACCCATTACCATGTCATATGATCTTGGATCATTCACGTTCCAACCCATTAAGGAAGCCATCGTGTCACGTGAGATGACTAGGAGGTACATGACTGACATGATTACTTATGCTGATACTGATGTTGTTGTTGTTGGTGCTGGATCTGCTGGTTTGTCTTGTGCTTATGAGCTTAGCAAAAACCCTAACGTTCAGGTAGCTATCATTGAGCAATCCGTGAGCCCAGGTGGTGGTGCATGGCTAGGTGGACAACTATTCTCAGCAATGGTTGTCCGCAAGCCCGCCCACCACTTCCTTGACGAGCTCGAGATCGAGTACGACGAGCAAGAAGACTACGTCGTCATCAAGCACGCCGCTTTGTTCACATCCACAATCATGAGCAAGCTTTTGGCCAGGCCAAATGTCAAGCTCTTCAACGCGGTTGCAGCTGAGGACTTGATCATCAAGGGAGGAAGAGTAGGTGGTGTTGTGACCAACTGGTCTTTGGTCGCACAGAACCACGACACACAATCATGCATGGACCCTAATGTTATGGAGGCTAAGGTTGTTGTCAGCTCGTGTGGCCATGATGGGCCCATGGGCGCTACTGGTGTTAAGAGGCTTAGGAGTGTTGGCATGATCGAGAGCGTTCCTGGGATGAAGGCTCTTGACATGAACACTGCCGAAGATGCGATTGTGAAGCTAACTAGAGAGATTGTTCCTGGTATGATTGTTACCGGGATGGAAGTTGCTGAGATCGATGGATCTCCCAGGATGGGGCCAACTTTTGGTGCTATGATGATCTCCGGCCAGAAGGCTGCTCATTTGGCCTTGAAGGCGTTGGGACTCCCAAATGCATTGGATGGAACATTGGTGGGAAGCCTCCACCCAGAGCTTATCCTGGCTGCTGCCGACTCTAGCGAGACTGTTGATGCCTAA	1044	49.62	MASMTTAFTSPLYTKTQSSFYGVPVTSPVRMIQPVRSSNKTNTPITMSYDLGSFTFQPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGGRVGGVVTNWSLVAQNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALDMNTAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTLVGSLHPELILAAADSSETVDA	347

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo13g01000	347	NCBIfam	sulfide-dependent adenosine diphosphate thiazole synthase	61	316	IPR002922	-
	Chmo13g01000	347	FunFam	Thiamine thiazole synthase, chloroplastic	81	316	-	-
	Chmo13g01000	347	PANTHER	THIAMINE THIAZOLE SYNTHASE	12	346	-	-
	Chmo13g01000	347	Gene3D	-	50	80	-	-
	Chmo13g01000	347	SUPERFAMILY	FAD-NAD(P)-binding domain	44	309	IPR036188	-
	Chmo13g01000	347	Hamap	Thiamine thiazole synthase, chloroplastic [THI4].	2	325	IPR027495	GO:0009228(InterPro)
	Chmo13g01000	347	Gene3D	-	81	316	IPR036188	-
	Chmo13g01000	347	Pfam	Thi4 family	65	298	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo13g01000	K03146	cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	46279	Chmo13g01000	Chmo16g01018
	46280	Chmo13g01000	Chmo17g00929
	46281	Chmo13g01000	Chmo18g01004
	216470	Chmo13g01000	Chmo14g00940

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	1301087	Chmo	Chmo13g01000	Chmo-Chr13:52311635	Chmo15g00872	Chmo-Chr15:50156075
	1493249	Chmo	Chmo13g01000	Chmo-Chr13:52311635	Chmo14g00940	Chmo-Chr14:46752065
	1496623	Chmo	Chmo13g01000	Chmo-Chr13:52311635	Chmo16g01018	Chmo-Chr16:43571731
	1496682	Chmo	Chmo13g01000	Chmo-Chr13:52311635	Chmo17g00929	Chmo-Chr17:39114250
	1496743	Chmo	Chmo13g01000	Chmo-Chr13:52311635	Chmo18g01004	Chmo-Chr18:43150776