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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo13g01031 ATGTCGAAACTGCTTATTCCACTTCTATTTGTTATCTTACAATTGGTGACTGTAAAAGGCTGGACAGGTGAAATACACGGGAGAGTTGTTTGTGATGTTTGTGCTGATGATTCTGTCGGTCCTGAAGATCATGTCTTACAAGGCGCAGAGGTTGCTGTTCTGTGCATAACAAAATCTGGTGAAGTTCTGAACTATCAAGCGTTTACAAATTCAAGGGGAATATACACAGTGGCTGAGACTATGCCTGAGAGTGAACGTTGGGATGCTTGTTTGGCAAGGCCTATTAGCAGCTACCATGAGCACTGTACTCATCTTGGTGACGGGTTTTCAGGTGTGAAGTTTAGTTACAATTATCAATCCGGGTACTCACACGCTGTCAAACCTTTTGTATATCGGCCCGTCAGTATTCCAATGTACTGTGCTTGA 426 43.19 MSKLLIPLLFVILQLVTVKGWTGEIHGRVVCDVCADDSVGPEDHVLQGAEVAVLCITKSGEVLNYQAFTNSRGIYTVAETMPESERWDACLARPISSYHEHCTHLGDGFSGVKFSYNYQSGYSHAVKPFVYRPVSIPMYCA 141
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo13g01031 141 PANTHER OS02G0317800 PROTEIN 4 140 - -
Chmo13g01031 141 Pfam Pollen protein Ole e 1 like 25 107 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo13g01031 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
216485 Chmo13g01031 Chmo14g00967
226319 Chmo15g00900 Chmo13g01031
239059 Chmo13g01031 Chmo15g00900
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1493266 Chmo Chmo13g01031 Chmo-Chr13:53783910 Chmo14g00967 Chmo-Chr14:48330586
1494467 Chmo Chmo13g01031 Chmo-Chr13:53783910 Chmo15g00900 Chmo-Chr15:52446070