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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo13g01034	ATGAGACGAAGAGCAGGAATCGGTGGATTACAAAACGCAGCAGCAGCTAGGGATCAGTATCGATTACTAGGAGAAAATGTAGCGAAACTGAGAACTGATTTAATGAAAGAACAGCTTTCCACTTTTCGTTCCCAGTTAGAAGACTTTGCTCGTAAACATAAGAATGATATTCGCAAGAACCCTGCTTTCAGATCACAGTTTCATGAGATGTGTGCGAAAGTTGGAGTCGATCCACTAGCGTCAAATAAAGGTTTTTGGGCCGAGCTATTAGGGATCGGTGATTTCTATTATGAACTTGGGGTGCAAATTGTTGATATATGCTTAGCCACTAGACCCCATAACGGGGGTTTGATCAATTTGGAGGAACTCTGCAAGGTTCTTAGTCAGAGACGTAAGGGTGCTCGTGAGGCAGTTTCTGAAGATGATTGTTTGCGTGCAATTGGTAAACTGAAGGTGTTAGGGAGTGGTTTTGAAGTGATAACTGTTGGTAAAAGAAAGCTTGTTCGGTCCGTCCCGACTGAATTGAAGAAAGATCACAATGAAATTCTAGAGCTGTCCCAGGCTCAAGGTTTTGTGACAGTTGAAGAAGTAGAGAGACGTCTATCGTGGTCCACTGGTCGTGCCACTGATGCCCTTGAAACTTTATTAGACGAGGGCCTTGCGATGATTGATGATGGACATAGAGATGGAAAACGCCGTTATTGGTTCCCTTGTGTGTCTTCAATCTCCTCCTTTGTGGCATCTTAG	747	43.78	MRRRAGIGGLQNAAAARDQYRLLGENVAKLRTDLMKEQLSTFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPHNGGLINLEELCKVLSQRRKGAREAVSEDDCLRAIGKLKVLGSGFEVITVGKRKLVRSVPTELKKDHNEILELSQAQGFVTVEEVERRLSWSTGRATDALETLLDEGLAMIDDGHRDGKRRYWFPCVSSISSFVAS	248

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo13g01034	248	SUPERFAMILY	Winged helix DNA-binding domain	24	174	IPR036390	-
	Chmo13g01034	248	PIRSF	ESCRT2-Vps22	1	245	IPR016689	GO:0000814(InterPro)\|GO:0071985(InterPro)
	Chmo13g01034	248	FunFam	Vacuolar protein sorting-associated protein	172	248	-	-
	Chmo13g01034	248	Gene3D	-	172	247	IPR036388	-
	Chmo13g01034	248	PANTHER	EAP30 SUBUNIT OF ELL COMPLEX	1	243	IPR016689	GO:0000814(PANTHER)\|GO:0000814(InterPro)\|GO:0043328(PANTHER)\|GO:0071985(InterPro)
	Chmo13g01034	248	SUPERFAMILY	Winged helix DNA-binding domain	175	239	IPR036390	-
	Chmo13g01034	248	Coils	Coil	117	137	-	-
	Chmo13g01034	248	FunFam	Vacuolar-sorting protein SNF8	91	171	-	-
	Chmo13g01034	248	Gene3D	-	24	85	-	-
	Chmo13g01034	248	Pfam	EAP30-Vps36 family	5	225	IPR040608	-
	Chmo13g01034	248	Gene3D	-	91	171	IPR036388	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo13g01034	K12188	ESCRT-II complex subunit VPS22

Event-related genes

Select	Gene_1	Gene_2	Event_name
	216487	Chmo13g01034	Chmo14g00971
	226321	Chmo15g00904	Chmo13g01034
	239061	Chmo13g01034	Chmo15g00904

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	1301120	Chmo	Chmo13g01034	Chmo-Chr13:53850186	Chmo18g00828	Chmo-Chr18:35330470
	1493269	Chmo	Chmo13g01034	Chmo-Chr13:53850186	Chmo14g00971	Chmo-Chr14:48392338
	1494470	Chmo	Chmo13g01034	Chmo-Chr13:53850186	Chmo15g00904	Chmo-Chr15:52475196