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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo13g01045 ATGGCTGATTTTGAAGCACCTTCATTATCTTTAGGTTTTGATTTTGATTCAGAAGACGATATTATAAACCTAGTTGTCGATGATTCGGATCCTGAATATCATCCGGACCCGAAGCGTTCCCGGCGTCGGGTCACCCACAATGCCACGTCATCATCATTTGTTCCGGTTGTGGAGTTGCGTACAGATGAAAAACTTCATAGACACGAGAGTGCTGAGTGTACTAGTTCAATGTTCCAACCAGATAGACTAAAAGAAAATGTTTTGAATACTCGGGGAGCGGTCTCAACAAGCTCCATAGATATTGATAAGTCTCTTCCCTACGCACATCATTATTTTTTCCACGATGATAGAAGGATCCAGGAGCTTGTCCGAATTCGCCTACCTTATTTTTCCCCTTTGGATGACCTGTCAAATAGTGACCTTGAGCAGCCGAGTGCATCAAATATCGATTACATGGGCCAATTTAGGTGTGGTGAAAGCTTAAAACAAGATTCTAGAAATATTAAGGGGATGAAAAGCTCAAATAGTAGGAAGAATTCAAGAAAATTAAAGAATGAAGATACGTCGGAAGGTTGGGTGAATCCGAAGGCTGGTGTTGATAAAGTGACAACAAAAAGAGCTCTGAATAAAAAGGGTCATTCAGCCCATCAAAATTCGGGGCATTGGATAACGTGCCCGGATGGAAAGAAAGTCTATGTTGGTAAAAAAGGTCAGGAGCTGACTGGGCGAGTTGCATACATGCAGTACAAAAAGGAGAATGGTTTAGGATTCAAAAAGAAGAAGAAATGA 789 41.32 MADFEAPSLSLGFDFDSEDDIINLVVDDSDPEYHPDPKRSRRRVTHNATSSSFVPVVELRTDEKLHRHESAECTSSMFQPDRLKENVLNTRGAVSTSSIDIDKSLPYAHHYFFHDDRRIQELVRIRLPYFSPLDDLSNSDLEQPSASNIDYMGQFRCGESLKQDSRNIKGMKSSNSRKNSRKLKNEDTSEGWVNPKAGVDKVTTKRALNKKGHSAHQNSGHWITCPDGKKVYVGKKGQELTGRVAYMQYKKENGLGFKKKKK 262
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo13g01045 262 MobiDBLite consensus disorder prediction 163 196 - -
Chmo13g01045 262 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 49 - -
Chmo13g01045 262 MobiDBLite consensus disorder prediction 27 43 - -
Chmo13g01045 262 MobiDBLite consensus disorder prediction 27 47 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo13g01045 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
216494 Chmo13g01045 Chmo14g00985
226328 Chmo15g00915 Chmo13g01045
239068 Chmo13g01045 Chmo15g00915
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1301128 Chmo Chmo13g01045 Chmo-Chr13:54058092 Chmo17g04945 Chmo-Chr17:309763412
1493279 Chmo Chmo13g01045 Chmo-Chr13:54058092 Chmo14g00985 Chmo-Chr14:48644527
1494480 Chmo Chmo13g01045 Chmo-Chr13:54058092 Chmo15g00915 Chmo-Chr15:52921766