Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo13g01120	ATGGCATTTTCATCACTTGTTGGATCATCAGTCAACACATCAATTGTGTTTGATTCACATCGTCAATCACTACCCACTTCTTCTTTTGTTAATAGATCACAGTTTAAGGTTCAGTCCACTGCAGAATCTCCATGTTTAAGGGTGAATAATGCGCGATGTGTAACTTCGATTAAAGCGACCGCTGCTACGCAGGTGCCACCAAGTGTTGCAAAGTCCGGTAGCGGAGGGAAGACCAAGGTTGGAATTAATGGTTTTGGAAGAATTGGAAGGTTGGTGTTGAGAATCGCATCATTTAGAGATGATATTGAGGTTGTTGCGGTCAACGACCCTTTTATTAACTCCGAATACATGGCTTACATGTTGAAGTATGATTCTACTCATGGCCTATTCAAAGGAACCATCAATGTTGTTGATGAGTCTACTTTGGAAATCAACGGGAAACAAATCAAAGTGACCAACCAAAGAGACCCTGCAGCGATTCCTTGGGGTGCTTCTGGAGCTGACTATGTTGTTGAATCTTCTGGTGTTTTTACAACACTTGATTCGGCTTCAGCACACAAAAAGGGTGGTGCGAAGAAGGTAGTGATCTCAGCTCCATCAGCTGATGCGCCTATGTTTGTTGTAGGAGTAAATGAGACCACTTACAAATCAAACATGGATATTGTATCCAATGCGAGCTGCACAACTAATTGCTTGGCTCCTTTGGCTAAGGTGGTTCATGAGGAGTTTGGTATTGTTGAAGGTTTGATGACAACTGTTCATGCTACCACAGCTACACAAAAAACTGTCGATGGACCTTCGATGAAGGATTGGCGTGGTGGTCGTGGTGCTGCACAAAACATCATCCCTAGCTCAACTGGTGCAGCCAAGGCTGTAGGGAAGGTGTTACCGGAACTAAATGGAAAACTCACAGGCATGGCCTTTAGAGTCCCAACAGCAAATGTCTCCGTTGTGGATTTAACTTGTCGACTTGAGAAAAGTGCTTCTTATGAAGATGTTAAAGCTGCTATAAAGTATGCCTCTGAGGGTCCACTGCAAGGAATCCTTGGATACACTGATGAGGATGTTGTCTCCAATGACTTCGTTGGTGATTCCAGGTCGAGTATATTTGATACAAAGGCTGGGATAGGGCTAAGTGCGTCATTTGTGAAGTTGGTGTCCTGGTATGATAACGAGTGGGGTTACAGCAACCGAGTGTTGGACCTGATTGAGCATATGGCGTTGGTGGCAGCTTCCAACTAA	1242	44.2	MAFSSLVGSSVNTSIVFDSHRQSLPTSSFVNRSQFKVQSTAESPCLRVNNARCVTSIKATAATQVPPSVAKSGSGGKTKVGINGFGRIGRLVLRIASFRDDIEVVAVNDPFINSEYMAYMLKYDSTHGLFKGTINVVDESTLEINGKQIKVTNQRDPAAIPWGASGADYVVESSGVFTTLDSASAHKKGGAKKVVISAPSADAPMFVVGVNETTYKSNMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVVDLTCRLEKSASYEDVKAAIKYASEGPLQGILGYTDEDVVSNDFVGDSRSSIFDTKAGIGLSASFVKLVSWYDNEWGYSNRVLDLIEHMALVAASN	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo13g01120	413	SMART	gp-dh-n-7	78	227	IPR020828	GO:0051287(InterPro)
	Chmo13g01120	413	ProSitePatterns	Glyceraldehyde 3-phosphate dehydrogenase active site.	225	232	IPR020830	GO:0016620(InterPro)
	Chmo13g01120	413	SUPERFAMILY	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	226	389	-	-
	Chmo13g01120	413	Pfam	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain	232	389	IPR020829	GO:0016620(InterPro)
	Chmo13g01120	413	FunFam	Glyceraldehyde-3-phosphate dehydrogenase	226	391	-	-
	Chmo13g01120	413	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	345	360	IPR020831	GO:0016620(InterPro)
	Chmo13g01120	413	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	221	239	IPR020831	GO:0016620(InterPro)
	Chmo13g01120	413	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	186	199	IPR020831	GO:0016620(InterPro)
	Chmo13g01120	413	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	305	322	IPR020831	GO:0016620(InterPro)
	Chmo13g01120	413	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	248	264	IPR020831	GO:0016620(InterPro)
	Chmo13g01120	413	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	77	243	IPR036291	-
	Chmo13g01120	413	Pfam	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain	79	179	IPR020828	GO:0051287(InterPro)
	Chmo13g01120	413	Gene3D	-	79	406	-	-
	Chmo13g01120	413	PANTHER	GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE	73	407	IPR020831	GO:0016620(InterPro)
	Chmo13g01120	413	NCBIfam	glyceraldehyde-3-phosphate dehydrogenase, type I	79	401	IPR006424	GO:0006006(InterPro)\|GO:0016620(InterPro)\|GO:0050661(InterPro)\|GO:0051287(InterPro)
	Chmo13g01120	413	Gene3D	Dihydrodipicolinate Reductase; domain 2	227	393	-	-
	Chmo13g01120	413	FunFam	Glyceraldehyde-3-phosphate dehydrogenase	78	237	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo13g01120	K00134	glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr13:57527470	Chmo15g00987	Chmo-Chr15:57088365	dispersed
	Chmo	Chmo-Chr5:204569910	Chmo13g01120	Chmo-Chr13:57527470	dispersed
	Chmo	Chmo-Chr13:57517274	Chmo13g01120	Chmo-Chr13:57527470	tandem