Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo13g01359	ATGAGTGTGGTATCCAAGGAAAGCATACAAGTGATGGCACAAAGTATTGGTCTTTCCAATTTATCTCCCGATGTTTTGCCTGATCTCGCTAACGATATCGAATACCGTGTTCGCGAGATCATGCAGGAAGCTATAAAAGTTATGCATCATGGTAAGAGAACTGTCTTGACTACAGAGGATGTGGATAATGCCCTCCAATTTAGAAAAATGGAGCCAATATATGTTGCAACTGGGAATTCTCTGCGGTTCAGAACGGCTGGTAGGCATAAGGATTTGTTTTACATCGAAGACAAAGATGTGGAATTTAGAGAGGTGATTGAAGCGCCTCTTCCAAAAGCGCCGTTAGATACTGCAGTTGTCGGTCATTGGCTGGCGATTGAAGGTGTACAACCTGCTATTCCTGAAAACCCTCCGCTTGAAGTACTCTTAGCACCATCTGAAAATAAGAAGCCTGATTCCAAAGAAGACGGGGTGTCTAATGATGTTAAAACTCCTGTGAAACATGTGCTCTCGATAGAGCTTCAGCTTTACTTTGAAAAGATCACAGATGTCACTGTAAGTCGGTCAAACTCGATCATCTTTGACAAAGCATTGATGAGCTTGGCGACCGATGCAGGGCTCCATCCTTTGGTTCCTTATTTCATATACTTTGTCGCTGAAGAGGTTACTCGTAACTTAAACAACTTTCAGCTTTTATTTGCTTTGATGCGACTTGTTCAAAGTCTTTTACAGAATCCAACCATGAACATTGAACCATATCTGCACCAACTGATGCCGTCTGTAATGACTTGTCTTGTTGCGAAAAGCTTGGGGAATAAGTTCACCGATAACCACTGGCAACTTAGAAACTTCACAGCTAACCTGGTGGCTTTAATATGCAAAAAGTTTGGGTATGTGTATCATAATCTCCAGTTACGTGTGACTAGGACTCTTCTTCATACTTTCTTGGATCCGGCAAAAGCATTTCCGCAGCATTATGGTGCCATAAAAGGGATTACTGCTCTAGGATTAAATGTGGTGCGTATGCTTTTGCTACCAAACCTTGATGCATATCTACAATTTATAGAACCAGAAATGCAACTTGAGAAGCAAAAGAACGAAAACAGGAGGCATGAGGCTTGGAGAGTGCATGGAGCTTTGATGTGTGCAGCGGGTCTATGCATTTACAATCAGCTTAAGACGATTCCCAATCTGTTAGCTCCACCAACACATAGCATCTGGAAGAAAAATGGAAAAGTCGGGACATCAAACCCAAACAAACGAAAGGCAGCGATGATGAACAACATGATGGAACAGCCACTTAAAAAAGTAGCAACAACTGATGGTTCACATCTGGTAAAGGTAGAGATGCAAGGAGGCAACAGCGGGTTTTCAATAACTCGTGATGGTGGGATGCATCAGCTACCAAGGTTTATGCCTAATGACAACATGCCAGGAAGCAGTGGCAGGAGGGACAAGTTCGGTGGCGTATCTCAGATGTCATCAGTGGCTGTGTCCCGAGCATGGAAAAAGGAAGTAAATGCTGGTCACTTGCTTCCTAAACTGTATGACGTTTTCGGTCAAAGCATGTTTCCTTTTGTACCTTCCCCAGAATTGTGTAATATACACCTATGA	1614	42.81	MSVVSKESIQVMAQSIGLSNLSPDVLPDLANDIEYRVREIMQEAIKVMHHGKRTVLTTEDVDNALQFRKMEPIYVATGNSLRFRTAGRHKDLFYIEDKDVEFREVIEAPLPKAPLDTAVVGHWLAIEGVQPAIPENPPLEVLLAPSENKKPDSKEDGVSNDVKTPVKHVLSIELQLYFEKITDVTVSRSNSIIFDKALMSLATDAGLHPLVPYFIYFVAEEVTRNLNNFQLLFALMRLVQSLLQNPTMNIEPYLHQLMPSVMTCLVAKSLGNKFTDNHWQLRNFTANLVALICKKFGYVYHNLQLRVTRTLLHTFLDPAKAFPQHYGAIKGITALGLNVVRMLLLPNLDAYLQFIEPEMQLEKQKNENRRHEAWRVHGALMCAAGLCIYNQLKTIPNLLAPPTHSIWKKNGKVGTSNPNKRKAAMMNNMMEQPLKKVATTDGSHLVKVEMQGGNSGFSITRDGGMHQLPRFMPNDNMPGSSGRRDKFGGVSQMSSVAVSRAWKKEVNAGHLLPKLYDVFGQSMFPFVPSPELCNIHL	537

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo13g01359	537	FunFam	Transcription initiation factor TFIID subunit 6	167	363	-	-
	Chmo13g01359	537	Pfam	TAF6 C-terminal HEAT repeat domain	166	348	IPR011442	GO:0006367(InterPro)
	Chmo13g01359	537	SUPERFAMILY	ARM repeat	197	392	IPR016024	-
	Chmo13g01359	537	CDD	TAF6C	167	383	IPR011442	GO:0006367(InterPro)
	Chmo13g01359	537	Gene3D	-	166	371	IPR046344	GO:0006367(InterPro)
	Chmo13g01359	537	Gene3D	Histone, subunit A	1	66	IPR009072	GO:0046982(InterPro)
	Chmo13g01359	537	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6	3	525	IPR037796	GO:0000124(InterPro)\|GO:0003713(PANTHER)\|GO:0005669(PANTHER)\|GO:0005669(InterPro)\|GO:0006367(InterPro)\|GO:0016251(InterPro)\|GO:0016251(PANTHER)\|GO:0046695(InterPro)\|GO:0051123(PANTHER)
	Chmo13g01359	537	Pfam	TATA box binding protein associated factor (TAF)	1	65	IPR004823	-
	Chmo13g01359	537	SMART	TAF-cls	2	68	IPR004823	-
	Chmo13g01359	537	SUPERFAMILY	Histone-fold	1	66	IPR009072	GO:0046982(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo13g01359	K03131	transcription initiation factor TFIID subunit 6

Event-related genes

Select	Gene_1	Gene_2	Event_name
	226420	Chmo15g01179	Chmo13g01359
	239160	Chmo13g01359	Chmo15g01179

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr13:70840372	Chmo3g02424	Chmo-Chr3:117752438	dispersed
	Chmo	Chmo-Chr13:70840372	Chmo15g01179	Chmo-Chr15:67811314	wgd