Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g00187 | ATGGCTCGGTGGATGGTTGGTCATGTTACATTGCTTGTGGTGTTGATTATGGTGGCATTTGGCGATGCAGCGACTCCACCTGGAATTGCTAAAAACCCTAGCCAAGCAACCTGTAAAGACCCGGCATATAAAGAATGTCATAACTTGGTTCATGTTTGTCCTAAGTTTTGTCCCAATGGTTGCACTGTTCATTGTCAATCGTGCAAACCTATTTGTATCAACTCCACTACCCCATCAGCACCGGTGTTAGCACCTCCACCACATGTATACTCGCCACCTCCAACTTCACCTCCAACATACGCTACTCCACCTACTCAATCGCCACCAAAATCATCACCTCCTCCTCCTACTCCTACTCCACCTTCTCCACCAACGAAATCCAAGTGCAAACTCCGAAGCTACCCACAATGTTATGCCACCGAACATGTTTGTCCAGCTTCTTGTCCCAATCAATGCGAAGTTGATTGTGTTTCCTGCAAGCCCATTTGCACTTGTGATATGCCAGGAGCAGTGTGCCAAGATCCTCGTTTTATTGGTGCTGATGGCATCACTTTCTATTTCCATGGAAAGAAAGATAACGATTTTTGCCTTGTTGCGGATAACCACCTCCACATCAATGGTCATTTCATTGGCAAGAGGAACAAAAACATGGGCAGAGACTTTACTTGGGTTCAATCCATTGGAGTATTGTTTGCCAATCACAAACTACAAATCAGTGCTCAAAAGACTGCCTCTTGGGATGATGCCATTGACCGTATCTCCATTACATTTGATGGGGAAACCATCCTTCTCCCAGAAACCGAAGGTGCCAAATGGCAATTATCCACAACCTCAATCACTAGGATTCAAGACACAAATAATGTCGTAGTCGAAGTTGATAACCTCTTTAAGATCACAGCCAAAGTGGTCCCGATAACAGAAGAAGACTCAAGAATCCATAACTATGGTGTAACTGATGATGATTGCCTTGCTCATCTTGATCTCAAGTTCAAGTTCTACTCCTTGAGTAACGAAGTGGACGGAGTTTTGGGACAGACTTACAAGAGCGACTATGTGAGCAATGTGAAAATGGGAGTGTTAATGCCTGTGATGGGAGGAGAAAAGAAGTTCAAGAGTGGAGAACTATTTGCTACTGATTGCTCTGTGGCTAAGTTCACGGGCAACCATGAGGACGATTCCTCTTTGAATTTGGAATTGCCAAGCTTGAAGTGCCAAAGTGGTTTGGATGGACGAGCTTGTGATATGCCAGGAGCAGTGTGTCAAGATCCTCGTTTTATTGGAGCTGACGGGATCACTTTCTACTTCCATGGAAAGAAGGATAAAGATTTCTGCCTTGTTGCCGACAACAACCTCCACATCGATGGTCACTTCATTGGCAAAAGAAACAAAAACATGGTCTCAGAAATCACCGCCGCTGCTGCCGCCATGTCGCTGCTGTTGCCGTCTGCCGTGACAACCGCAACAGCACCACCTCCTTCCTGTCTTCTCTTCTTCTTCTCTTCTTCTCTTTCAGCAATAAACCAACGAATGGCGTGTGTTGCTCCTGGCTACTACGGAAGGGATGCAGGCGGTGATCCACCCGAGGATCGACAGCCTAAGCGTTTACCTATATTGTGGATGATTATATACACCCAGAATGTAGGTAGTGATTTAACAATGAAAGGATATCCTTCTTGGCTTGCTAAGGGAGAAATGACAACTATTCAAGATGCGGTCAAGGAAAAAAAGATGTTACCCAAAACAGACCGCGAGATCATCGATGAAGTCCTGGATTCTCAAAATCGGGGACATATTGCGGGTGTGGGCAGGGTGGTACCAGGCACGGGCTCGAGTTCTAGGAGCACACAAGTCGACACAGGTTTTATTACCCGGGAGGAGGTTGAAGAGATGAAGAAAAAGCATGCTATGGAGCTGCAGGAGCAAAGAAACTTGTTGAAGCAATTTCTGGATTTTTACAACCGTCAACAAGGTACACCCGCTTCACAGTTTCAAACCGATAAGTGTTACAAGCCGATAAGTGTTGATGAAGATGATGATGGTGTTGATGTGGTTGCTGTTGTAAGACTTTACATGGGTCCAATCTATTGGGGTTCTCTTTGCGAATCACAAACTACAAATCAATGCTCAAAAGACTACCACTTTTGGGATGATACCATTGACCGTATCTCTATTCCATATGACGGGGAAAGCATCTTCCTCCCAGAAACCAAAGGTGCCAAATGGCAATCTTCCACAACCTCAATTACTAGGACTCAGGATACATATGATGTCGTTCTTGAAGTTGATAACCTCTTCAAAATCACGGTCAAAGTGGTTCCAATAACAAAAGAAGAGTCAAGAATTCATGACTATGGTATTACACTATTACCGATGATGATTGCTTTGCTCATCTATTTGCCACTGATTGCTCTGTGGCTAAGTTTACGGGCAACCAAGAACATGGTTCCTCTCTAA | 2454 | 44.66 | MARWMVGHVTLLVVLIMVAFGDAATPPGIAKNPSQATCKDPAYKECHNLVHVCPKFCPNGCTVHCQSCKPICINSTTPSAPVLAPPPHVYSPPPTSPPTYATPPTQSPPKSSPPPPTPTPPSPPTKSKCKLRSYPQCYATEHVCPASCPNQCEVDCVSCKPICTCDMPGAVCQDPRFIGADGITFYFHGKKDNDFCLVADNHLHINGHFIGKRNKNMGRDFTWVQSIGVLFANHKLQISAQKTASWDDAIDRISITFDGETILLPETEGAKWQLSTTSITRIQDTNNVVVEVDNLFKITAKVVPITEEDSRIHNYGVTDDDCLAHLDLKFKFYSLSNEVDGVLGQTYKSDYVSNVKMGVLMPVMGGEKKFKSGELFATDCSVAKFTGNHEDDSSLNLELPSLKCQSGLDGRACDMPGAVCQDPRFIGADGITFYFHGKKDKDFCLVADNNLHIDGHFIGKRNKNMVSEITAAAAAMSLLLPSAVTTATAPPPSCLLFFFSSSLSAINQRMACVAPGYYGRDAGGDPPEDRQPKRLPILWMIIYTQNVGSDLTMKGYPSWLAKGEMTTIQDAVKEKKMLPKTDREIIDEVLDSQNRGHIAGVGRVVPGTGSSSRSTQVDTGFITREEVEEMKKKHAMELQEQRNLLKQFLDFYNRQQGTPASQFQTDKCYKPISVDEDDDGVDVVAVVRLYMGPIYWGSLCESQTTNQCSKDYHFWDDTIDRISIPYDGESIFLPETKGAKWQSSTTSITRTQDTYDVVLEVDNLFKITVKVVPITKEESRIHDYGITLLPMMIALLIYLPLIALWLSLRATKNMVPL | 817 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g00187 | 817 | Coils | Coil | 624 | 644 | - | - | |
| Chmo14g00187 | 817 | MobiDBLite | consensus disorder prediction | 93 | 125 | - | - | |
| Chmo14g00187 | 817 | MobiDBLite | consensus disorder prediction | 93 | 127 | - | - | |
| Chmo14g00187 | 817 | PANTHER | ROOT CAP DOMAIN-CONTAINING PROTEIN | 713 | 787 | - | - | |
| Chmo14g00187 | 817 | Pfam | Root cap | 329 | 385 | IPR009646 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g00187 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr14:7862836 | Chmo15g00150 | Chmo-Chr15:9074469 | dispersed | |
| Chmo | Chmo-Chr14:7841585 | Chmo14g00187 | Chmo-Chr14:7862836 | tandem |