Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo14g00241	ATGCCAGCTACAAAGAATGGTAAGTTTGGGTTCAACTTGTTGGTGGGTGGATTCTTTAGTCCAAAAAGATGTGCAGAGGCTATTCCTCTCGATGCTTGGGTCCCAGCTGAAGATGTTGTCCCCGTTTGTGGGGCGATTCTTGAGGCTTATCGTGATCTTGGTACAAGAGGGAACAGGCAAAAGACTAGAATGATGTGGTTGATCGATGAACTCGGTGTAGAAGGGTTTCGATCTGAAGTGGTAAAGAGAATGCCCGAACAAGCATTGGACAGGGCTTCTTCCGAAGATCTTGTTGATCCAAAATGGGAAAGAAGGGATTACTTTGGTGTGCACCCACAGAAACAAGAAGGCCTTAGCTTTGTGGGCATTCACATTCCCGTGGGCCGGGTCCAAGCCGATGACATGGACCAATTAGCCCGGTTAGCCGACGAGTATGGCTCAGGTGAGCTTCGGTTGACAGTGGAACAAAACATCATAATCCCAAACATACCAAACTCAAAAGTCGAAGCTTTACTTAACGAGCCTCTTCTAAAAGAGAAGTTTTTACCCGAGCCACCTATTTTGATGAAAGGGTTAGTAGCTTGCACTGGTAACCAATTTTGTGGACAAGCCATAATAGAAACAAAAGCCCGTGCTTTGAAGGTTGCAGAAGAAGTTGAGAAACTTGTTTCCGTGACCTATCCAGTGCGGATGCACTGGACTGGCTGCCCTAACACGTGTGGCCAGGTTCAAGTGGCGGATATAGGATTTATGGGATGCATGACTAGGGACAAAAATGGAAAGGTAGTCGAAGGAGCCGATGTTTACTTGGGAGGTAGAATTGGAAGTGACTCACATTTGGGAGATATCTATAAAAAGGCTGTCCCTTGCGAGGACTTGGTGCCTTTAGTTGTGGACATTATGGTCGAAAAATTTGGCGCTGTTCTGAGAGAAAGAGAAGAGAGCGAAGAGTGA	954	46.33	MPATKNGKFGFNLLVGGFFSPKRCAEAIPLDAWVPAEDVVPVCGAILEAYRDLGTRGNRQKTRMMWLIDELGVEGFRSEVVKRMPEQALDRASSEDLVDPKWERRDYFGVHPQKQEGLSFVGIHIPVGRVQADDMDQLARLADEYGSGELRLTVEQNIIIPNIPNSKVEALLNEPLLKEKFLPEPPILMKGLVACTGNQFCGQAIIETKARALKVAEEVEKLVSVTYPVRMHWTGCPNTCGQVQVADIGFMGCMTRDKNGKVVEGADVYLGGRIGSDSHLGDIYKKAVPCEDLVPLVVDIMVEKFGAVLREREESEE	317

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo14g00241	317	Pfam	Nitrite-Sulfite reductase ferredoxin-like half domain	111	175	IPR005117	GO:0016491(InterPro)
	Chmo14g00241	317	Gene3D	-	44	185	-	-
	Chmo14g00241	317	SUPERFAMILY	Nitrite and sulphite reductase 4Fe-4S domain-like	190	301	IPR045854	-
	Chmo14g00241	317	SUPERFAMILY	Nitrite and sulphite reductase 4Fe-4S domain-like	2	93	IPR045854	-
	Chmo14g00241	317	PRINTS	Sirohaem Fe-binding site signature	190	208	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Chmo14g00241	317	PRINTS	Sirohaem Fe-binding site signature	234	252	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Chmo14g00241	317	ProSitePatterns	Nitrite and sulfite reductases iron-sulfur-siroheme-binding site.	234	250	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Chmo14g00241	317	Pfam	Nitrite and sulphite reductase 4Fe-4S domain	3	86	IPR006067	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Chmo14g00241	317	Pfam	Nitrite and sulphite reductase 4Fe-4S domain	192	303	IPR006067	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Chmo14g00241	317	Gene3D	Sulfite Reductase Hemoprotein, domain 1	186	316	IPR045854	-
	Chmo14g00241	317	PANTHER	FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC	1	316	IPR051329	-
	Chmo14g00241	317	SUPERFAMILY	Nitrite-Sulfite reductase N-terminal domain-like	65	201	IPR036136	GO:0016491(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo14g00241	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	232195	Chmo13g00166	Chmo14g00241

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr14:10219744	Chmo15g00202	Chmo-Chr15:11375025	dispersed
	Chmo	Chmo-Chr14:10219744	Chmo14g00243	Chmo-Chr14:10262436	proximal