AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g00263 | ATGGGTGGGAATCTTTATTGGGTAAAAAATGATTTTGATGATGAGACTAAATTTGAAGGGGTTGTTGTGGTTTTTGTATGGGCAAGTTTTGTTGATGTTAAGGATTATGTGGAGCTTTATTCTTCTTTTGGATGGAATTCACTTGTTGTTGTCTCTGATTTTCTTAATCCATTTTTCCCTGAGAGAGCCACATCACTTGCTTTTTCCGTCATCAATGAGCTTTTAGAGGAGTTGAGGGCTAGACCATGTCCGTTAGTCCTTGCATCCTTTTCTGGTGGTTCACAAGCTTGTATGTACAAGGTTTTTCAGATCATTGAAGGAACATGTGAAGCACATCTCAGTCTGGATGATAGTCGGTTAATCATGACATGTATATCTGGTCAAATGTACGATTCTGGTCCAGTTAATGTTACTGGTGATCTGGGTGCCCGGTTTGCTTTACATTCCTCCAATGTGCCTGGTTCGTCAAAGCTGGTATCAATGGTTGCAAAAGGCGTCACGTCTGGTCTCGATGCTCTATTCCTTACTAGATTTGGATCCCAACGCTCCGAGTACTGGCAAACGCTTTACTCCTCAGTTGGTTTGGGAGCTCCGTTTCTAATATTATGTTCAGAAAGTGATGATCTTGCTCCATATCCAGTTGTATACTCATTTGCTCAACAAGTACAAGGACTAGGAGGACATGTTCGGCTTTTTGGATGGAAGGACTCTCCTCATGTTGGTCACTACAAGCACAATCCCACAGAGTACAGAGCAGCTGTAAACGAATTCTTTGACCACTCTGTTTCAATATTCAACCAAAAGCTACAACAACTTGCTGAACGAACCGGCATGGAAGGTATGCACGATAAAATATGTGAATTAGTTTGCGACCTACAAAATGCTGCAGTTGACTCAAACCAGAGCCTTAGAAGAGTAGCAATCGGACCAAATGACCACTTCTTCTTACCAAGTTCAGCTGAATATCAAAGCAGTAAAGAATCTGGATCGTTACAAGATGAGCAAAAAGAAAGAAAAGCTGTCCTTTTGGCAAGTCCACCGAGCCTAAATCCACACAGTGTTCTTGGTCAAGTTCTGTTTGATGTTTGTGTGCCTAAAAACATCGAAGGTTGGGATATCAAGTTTGATAATAGGAAGCCATTTGGGTCTACTTCTCGTAAGGGCTCATTGTTAAATCCCATAAAACGCATGAGACGATCAAGATTATGA | 1209 | 41.36 | MGGNLYWVKNDFDDETKFEGVVVVFVWASFVDVKDYVELYSSFGWNSLVVVSDFLNPFFPERATSLAFSVINELLEELRARPCPLVLASFSGGSQACMYKVFQIIEGTCEAHLSLDDSRLIMTCISGQMYDSGPVNVTGDLGARFALHSSNVPGSSKLVSMVAKGVTSGLDALFLTRFGSQRSEYWQTLYSSVGLGAPFLILCSESDDLAPYPVVYSFAQQVQGLGGHVRLFGWKDSPHVGHYKHNPTEYRAAVNEFFDHSVSIFNQKLQQLAERTGMEGMHDKICELVCDLQNAAVDSNQSLRRVAIGPNDHFFLPSSAEYQSSKESGSLQDEQKERKAVLLASPPSLNPHSVLGQVLFDVCVPKNIEGWDIKFDNRKPFGSTSRKGSLLNPIKRMRRSRL | 402 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g00263 | 402 | PANTHER | UNCHARACTERIZED | 5 | 266 | IPR008547 | - | |
| Chmo14g00263 | 402 | Gene3D | alpha-beta hydrolase | 144 | 268 | IPR029058 | - | |
| Chmo14g00263 | 402 | Pfam | Eukaryotic protein of unknown function (DUF829) | 125 | 371 | IPR008547 | - | |
| Chmo14g00263 | 402 | SUPERFAMILY | alpha-beta-Hydrolases | 7 | 258 | IPR029058 | - | |
| Chmo14g00263 | 402 | SUPERFAMILY | alpha-beta-Hydrolases | 185 | 260 | IPR029058 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g00263 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 232206 | Chmo13g00194 | Chmo14g00263 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr14:10872636 | Chmo15g00224 | Chmo-Chr15:12368269 | dispersed | |
| Chmo | Chmo-Chr13:7761597 | Chmo14g00263 | Chmo-Chr14:10872636 | wgd | |
| Chmo | Chmo-Chr14:10872636 | Chmo15g00223 | Chmo-Chr15:12350971 | wgd | |
| Chmo | Chmo-Chr14:10872636 | Chmo22g01226 | Chmo-Chr22:66539340 | wgd | |
| Chmo | Chmo-Chr14:10872636 | Chmo23g01354 | Chmo-Chr23:74620254 | wgd | |
| Chmo | Chmo-Chr14:10872636 | Chmo24g01320 | Chmo-Chr24:75026606 | wgd |