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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo14g00335 ATGGCTACAAATTGGATCACGTTTTCAGCAATGATTATCGCGATGGTGATCGGGGTACATTCCATAGACACTAATACCGTGTTTAATCCATGTTCAGATACAAAAGTGCAAAGATGGGATGGATTTACCTTTGGACTCGCGTTTTCTTCAAAGGATTCCTTCTTTTCCGACCAGATACAACTTTCACCTTGTGATAGTCGTCTATCTCTTGCTGGAACCAATGCTCGACTCTCAGTTTTTAGGCCAAAAGTCGATGAGCTTACTTATCTCACCATCAATACCTCCGACTTTGATCTGGCAAAAGCTGGTGGATATATGGTTGCATTTGCTGGAAGACAATATGCAGCAAGATCAATACCTACTTTAGTTGCTGATAAATCAAATATCATTACAAGTTTCACTTTGGTTCTGGAATTTCAAGAAGGGAGGCTCGTAAACTTATACTGGAAGAAATTTGGGTGTAAATCGTGTGGAGAAAGATCAGGCGTTTGCCTCAACAATCAAGAATGTGTTACACCCGTCAATAAATGCAAGAATAATGGTGGATCGGTTGATTGCAACATTAGCATACAATTAGCATTCTCGGGTACAGACAAGACTTTAGAAGCTCTTAACTCGTGGTATGAGGTCGAAAAACTTAGGCAATATTCACTAGTTGAGTTGTATCAAAACATCAATGACTTGGTTATTGGTAAATAG 699 39.34 MATNWITFSAMIIAMVIGVHSIDTNTVFNPCSDTKVQRWDGFTFGLAFSSKDSFFSDQIQLSPCDSRLSLAGTNARLSVFRPKVDELTYLTINTSDFDLAKAGGYMVAFAGRQYAARSIPTLVADKSNIITSFTLVLEFQEGRLVNLYWKKFGCKSCGERSGVCLNNQECVTPVNKCKNNGGSVDCNISIQLAFSGTDKTLEALNSWYEVEKLRQYSLVELYQNINDLVIGK 232
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo14g00335 232 PANTHER DPH3 HOMOLOG-RELATED 12 229 - GO:0005829(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo14g00335 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
226109 Chmo14g00335 Chmo13g00318
228761 Chmo13g00318 Chmo14g00335
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr14:14057599 Chmo19g01321 Chmo-Chr19:69003773 dispersed
Chmo Chmo-Chr13:13891622 Chmo14g00335 Chmo-Chr14:14057599 wgd