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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo14g00417 ATGAGTATGAAGATTTGTGTCCTAACTCTTCTTATTGCATCCTCACTTGTATCATCATCATCTGCAGCTCGATGTGGATCATCCATTCCAATGGTGAAAGTTGGTGCAACTGACGAAAATGAGGAATCTTTATATTCAGAACATGATCAAACATCAACAAGGGACGATATCCATGAGAGGCTGCTAAGGGCTAATACAAGAGATTATGGACGAGCTGATCCTGCACCAACGTTTGTCAAGCCACCTTTTAAACTCATACCAAACTAG 267 40.82 MSMKICVLTLLIASSLVSSSSAARCGSSIPMVKVGATDENEESLYSEHDQTSTRDDIHERLLRANTRDYGRADPAPTFVKPPFKLIPN 88
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo14g00417 88 PANTHER PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATED 3 88 IPR038974 -
Chmo14g00417 88 MobiDBLite consensus disorder prediction 69 88 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo14g00417 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213558 Chmo14g00417 Chmo15g00295
225842 Chmo13g00453 Chmo14g00417
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr13:20152959 Chmo14g00417 Chmo-Chr14:17192658 wgd
Chmo Chmo-Chr14:17192658 Chmo15g00295 Chmo-Chr15:15484378 wgd